RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 FAM149AA5PLN7 773 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 FAM172BPA6NC97 362 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 TMEM189-UBE2V1I3L0A0 370 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 TPPPO94811 219 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 UGT2B4P06133 528 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 RBP1P09455 135 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 HIST1H2AGP0C0S8 130 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 HIST1H2ADP20671 130 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ITGAXP20702 1163 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 CTGFP29279 349 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ALDH4A1P30038 563 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 THOP1P52888 689 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 MYBPC1Q00872 1141 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 CHRNB3Q05901 458 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 DMC1Q14565 340 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 SF3B4Q15427 424 aaKnown RBP eCLIP5.65□□□□□ -1.51
RFFL-202ENST00000394597 CCDC142Q17RM4 750 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 KLHL12Q53G59 568 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 SMUG1Q53HV7 270 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ZNF470Q6ECI4 717 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 FRMD7Q6ZUT3 714 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 PLEKHM3Q6ZWE6 761 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 GPR180Q86V85 440 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 LRRTM3Q86VH5 581 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 NAT8LQ8N9F0 302 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ANKLE1Q8NAG6 615 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 DENND1AQ8TEH3 1009 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 FAR1Q8WVX9 515 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 AUTS2Q8WXX7 1259 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 CCDC126Q96EE4 140 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 HIST1H2AHQ96KK5 128 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 RNF145Q96MT1 663 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ZNF347Q96SE7 839 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 NPAS2Q99743 824 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 HIST1H2AJQ99878 128 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 H2AFJQ9BTM1 129 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ZSCAN5AQ9BUG6 496 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 SLC25A51Q9H1U9 297 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 CLEC4MQ9H2X3 399 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 SIAEQ9HAT2 523 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 POLE4Q9NR33 117 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.65□□□□□ -1.513e-7■■■■□ 22.4
RFFL-202ENST00000394597 EHD3Q9NZN3 535 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 TMEM9Q9P0T7 183 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 HSFX1Q9UBD0 423 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 MTRRQ9UBK8 725 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 AGO1Q9UL18 857 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 PNMA8BQ9ULN7 279 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 ZFP37Q9Y6Q3 630 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 EVPLQ92817 2033 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 SRCAPQ6ZRS2 3230 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 A0A1B0GVM2 712 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 TCAF2A6NFQ2 919 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 UBDO15205 165 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 TYROBPO43914 113 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 H2AFYO75367 372 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 METTL18O95568 372 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ITGB1P05556 798 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 AOC1P19801 751 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 HLA-DPA1P20036 260 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 SERPINA4P29622 427 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ADSLP30566 484 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 YAP1P46937 504 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 GLRBP48167 497 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 SNRPD1P62314 119 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 POLR2LP62875 67 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 IL10RBQ08334 325 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 FOXD4Q12950 439 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 SEMA5AQ13591 1074 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 GTF2H3Q13889 308 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 FASTKQ14296 549 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 KRT33BQ14525 404 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 PON2Q15165 354 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 CERCAMQ5T4B2 595 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 OGFRL1Q5TC84 451 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 FBXL19Q6PCT2 694 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.65□□□□□ -1.51
RFFL-202ENST00000394597 GPRIN1Q7Z2K8 1008 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 LUZP2Q86TE4 346 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 CMTR2Q8IYT2 770 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 SPERTQ8NA61 448 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 C3orf58Q8NDZ4 430 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ENKURQ8TC29 256 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 HMCESQ96FZ2 354 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 SERAC1Q96JX3 654 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 VPS35Q96QK1 796 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 MLPHQ9BV36 600 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 WDR55Q9H6Y2 383 aaPredicted RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 COG4Q9H9E3 785 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 MAGEE1Q9HCI5 957 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 IL23AQ9NPF7 189 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 HPS4Q9NQG7 708 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 EIF2B3Q9NR50 452 aaKnown RBP5.65□□□□□ -1.51
RFFL-202ENST00000394597 LATS2Q9NRM7 1088 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 TMLHEQ9NVH6 421 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 FNIP2Q9P278 1114 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 ANKRD6Q9Y2G4 727 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 BACE2Q9Y5Z0 518 aa5.65□□□□□ -1.51
RFFL-202ENST00000394597 CPQQ9Y646 472 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms