RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NKX1-2Q9UD57 310 aaPredicted RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 TRMT6Q9UJA5 497 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 CDH7Q9ULB5 785 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 BRWD1Q9NSI6 2320 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 TMEM114B3SHH9 223 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 SUPT3HB4E1H0 165 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 PEX11AO75192 247 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 VPS26AO75436 327 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 SUPT3HO75486 399 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 ATP5BP06576 529 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 NCF2P19878 526 aaPredicted RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 GJA4P35212 333 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 SPINT3P49223 89 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 RPL14P50914 215 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 FOXA1P55317 472 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 CREB5Q02930 508 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 DMC1Q14565 340 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 ZNF678Q5SXM1 525 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 EPGNQ6UW88 154 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 APLFQ8IW19 511 aaPredicted RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 BEND7Q8N7W2 519 aaPredicted RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 ENDOVQ8N8Q3 282 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 PTCD3Q96EY7 689 aaKnown RBP14.81□□□□□ -0.04
MKS1-202ENST00000393119 KCNA7Q96RP8 456 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 MIPEPQ99797 713 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 WWP1Q9H0M0 922 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 LRMDAQ9H2I8 198 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 RNPEPL1Q9HAU8 725 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 PPIL1Q9Y3C6 166 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 RAP2CQ9Y3L5 183 aa14.81□□□□□ -0.04
MKS1-202ENST00000393119 ENO4A6NNW6 628 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 MATN2O00339 956 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 NFATC1O95644 943 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 ITGALP20701 1170 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 C9orf64Q5T6V5 341 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 SERPINA13PQ6UXR4 307 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 CCDC106Q9BWC9 280 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 SPATA16Q9BXB7 569 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 CLPBQ9H078 707 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 ADAMTS6Q9UKP5 1117 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 RNF112Q9ULX5 631 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 MEI4A8MW99 385 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 CAPN14A8MX76 684 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 SPINT1O43278 529 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 GFAPP14136 432 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 PRDX3P30048 256 aaKnown RBP14.8□□□□□ -0.04
MKS1-202ENST00000393119 GDI1P31150 447 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 IL12RB1P42701 662 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 RALGDSQ12967 914 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 RUNX3Q13761 415 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 TAF11Q15544 211 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 ACSBG2Q5FVE4 666 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 SPDYAQ5MJ70 313 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 GRAMD4Q6IC98 578 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 NXPE1Q8N323 547 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 ARRDC3Q96B67 414 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 S1PR5Q9H228 398 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 NSUN3Q9H649 340 aaKnown RBP14.8□□□□□ -0.04
MKS1-202ENST00000393119 SAR1AQ9NR31 198 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 CLDND1Q9NY35 253 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 GDE1Q9NZC3 331 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 GIMAP2Q9UG22 337 aa14.8□□□□□ -0.04
MKS1-202ENST00000393119 ANKRD12Q6UB98 2062 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 DOCK8Q8NF50 2099 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 ATG2BQ96BY7 2078 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 TRBV5-4A0A0C4DH59 114 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 LOC100653049A0A140TA62 436 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 DPPA5A6NC42 116 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 KRT34O76011 436 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 GM2AP17900 193 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 CALB2P22676 271 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 ST8SIA6P61647 398 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 SH3BP2P78314 561 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 PPP1R3AQ16821 1122 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 THEMIS2Q5TEJ8 643 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 EGFLAMQ63HQ2 1017 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 UGT3A1Q6NUS8 523 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 CUZD1Q86UP6 607 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 LCA5Q86VQ0 697 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 DLG3Q92796 817 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 KCNJ9Q92806 393 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 KIAA1191Q96A73 305 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 PLEKHG4BQ96PX9 1271 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 RIOK2Q9BVS4 552 aaKnown RBP14.79□□□□□ -0.04
MKS1-202ENST00000393119 YIPF3Q9GZM5 350 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 DERL2Q9GZP9 239 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 LMAN2LQ9H0V9 348 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 MID2Q9UJV3 735 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 APPL1Q9UKG1 709 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 APOBEC2Q9Y235 224 aaKnown RBP14.79□□□□□ -0.04
MKS1-202ENST00000393119 SLC27A6Q9Y2P4 619 aa14.79□□□□□ -0.04
MKS1-202ENST00000393119 ATP6AP2A0A1C7CYW4 349 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 FADS2P1A8MWK0 482 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 DCXO43602 365 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ATP6AP2O75787 350 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ESR1P03372 595 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 TPBGLP0DKB5 382 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ALOX15P16050 662 aaPredicted RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 IMPDH1P20839 514 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms