RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 XIAPP98170 497 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 NFATC2Q13469 925 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 KIR2DS5Q14953 304 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 INSCQ1MX18 579 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.67□□□□□ -0.54
RFC4-202ENST00000392481 GPRC6AQ5T6X5 926 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 IGF2-ASQ6U949 168 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 B3GNT8Q7Z7M8 397 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 TRAPPC5Q8IUR0 188 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 REXO1L1PQ8IX06 675 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 TAB3Q8N5C8 712 aaPredicted RBP11.67□□□□□ -0.54
RFC4-202ENST00000392481 CCDC89Q8N998 374 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 AVL9Q8NBF6 648 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 OR13C4Q8NGS5 318 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 WDR36Q8NI36 951 aaKnown RBP11.67□□□□□ -0.54
RFC4-202ENST00000392481 LIN37Q96GY3 246 aaPredicted RBP11.67□□□□□ -0.54
RFC4-202ENST00000392481 STRADBQ9C0K7 418 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 ETNK1Q9HBU6 452 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 HOMER3Q9NSC5 361 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 PAK5Q9P286 719 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 SLC23A2Q9UGH3 650 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 RAXQ9Y2V3 346 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 PCDHGA8Q9Y5G5 932 aa11.67□□□□□ -0.54
RFC4-202ENST00000392481 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 CCDC187A0A096LP49 1063 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 A0A1W2PNU3 283 aaPredicted RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 AGAP14A8MT82 685 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 GPR39O43194 453 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 KCNJ13O60928 360 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 SUN1O94901 812 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 VCLP18206 1134 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 CD1CP29017 333 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 CXCR5P32302 372 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 CA5AP35218 305 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 ZFP36L1Q07352 338 aaKnown RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 EIF3IQ13347 325 aaKnown RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 SQSTM1Q13501 440 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 SEMA5AQ13591 1074 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 LONRF2Q1L5Z9 754 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 TBC1D25Q3MII6 688 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 AMZ1Q400G9 498 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 C3orf38Q5JPI3 329 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 PIM3Q86V86 326 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 RASGEF1AQ8N9B8 481 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 FGF11Q92914 225 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 ULK4Q96C45 1275 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 ZNF514Q96K75 400 aaPredicted RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 ZNF578Q96N58 590 aaPredicted RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 FOXP3Q9BZS1 431 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 OSGEPL1Q9H4B0 414 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 STN1Q9H668 368 aaKnown RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 ASB8Q9H765 288 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 PRDM8Q9NQV8 689 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 RAB6BQ9NRW1 208 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 ATXN7L1Q9ULK2 861 aaPredicted RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 DNMT3AQ9Y6K1 912 aaPredicted RBP11.66□□□□□ -0.54
RFC4-202ENST00000392481 PTPRQQ9UMZ3 2332 aa11.66□□□□□ -0.54
RFC4-202ENST00000392481 IGHV1OR21-1A0A087WYE8 117 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 E7EVH7 732 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 H7C0S8 307 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 ETS1P14921 441 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 MSH3P20585 1137 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 ITGALP20701 1170 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 IDSP22304 550 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 PSMA3P25788 255 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 AKT1P31749 480 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 RPL22P35268 128 aaKnown RBP11.65□□□□□ -0.54
RFC4-202ENST00000392481 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
RFC4-202ENST00000392481 LMAN1P49257 510 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 CTSCP53634 463 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 ERVPABLB-1P60509 514 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 GPLD1P80108 840 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 HHEXQ03014 270 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 CDH17Q12864 832 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 POU6F1Q14863 301 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 PLA2G4EQ3MJ16 856 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 MAP9Q49MG5 647 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 GPR33Q49SQ1 333 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 AGAP9Q5VTM2 703 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 ABRAXAS1Q6UWZ7 409 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 WASH2PQ6VEQ5 465 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 USP53Q70EK8 1073 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 SLC9B2Q86UD5 537 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 AMZ2Q86W34 360 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 SLITRK4Q8IW52 837 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 GLIS1Q8NBF1 620 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 SNIP1Q8TAD8 396 aaKnown RBP11.65□□□□□ -0.54
RFC4-202ENST00000392481 STYXQ8WUJ0 223 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 PDLIM2Q96JY6 352 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 PBKQ96KB5 322 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 DNAJC1Q96KC8 554 aaKnown RBP11.65□□□□□ -0.54
RFC4-202ENST00000392481 SLC46A1Q96NT5 459 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 SLC38A3Q99624 504 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 DPYSL5Q9BPU6 564 aa11.65□□□□□ -0.54
RFC4-202ENST00000392481 EPB41L5Q9HCM4 733 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms