RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ATP1A2P50993 1020 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 DRG2P55039 364 aaKnown RBP16.34■□□□□ 0.21
PTPRK-208ENST00000392449 SIRPB2Q5JXA9 342 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 PRICKLE2Q7Z3G6 844 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 LRRTM4Q86VH4 590 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 UNC5BQ8IZJ1 945 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 CACNA2D3Q8IZS8 1091 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 ZNF567Q8N184 647 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 TC2NQ8N9U0 490 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 ZSCAN1Q8NBB4 408 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 KRT35Q92764 455 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 SLC12A9Q9BXP2 914 aa16.34■□□□□ 0.21
PTPRK-208ENST00000392449 KLHL8Q9P2G9 620 aaPredicted RBP16.34■□□□□ 0.21
PTPRK-208ENST00000392449 hCG_1818297A0A087WSY0 165 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 OR52A4PA6NMU1 304 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 PSTPIP1O43586 416 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 CDK14O94921 469 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 ITGB2P05107 769 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 SLC2A4P14672 509 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 NR2C2P49116 596 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 EPHA4P54764 986 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 MC2RQ01718 297 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 TFDP2Q14188 446 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 PTPRCAPQ14761 206 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 SLC14A2Q15849 920 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 CCDC70Q6NSX1 233 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 TIPARPQ7Z3E1 657 aaKnown RBP16.33■□□□□ 0.2
PTPRK-208ENST00000392449 CCDC50Q8IVM0 306 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 TTC30BQ8N4P2 665 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 IPMKQ8NFU5 416 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 P3H4Q92791 437 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 SH3KBP1Q96B97 665 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 MRGPRX2Q96LB1 330 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 HEMGNQ9BXL5 484 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 ASPSCR1Q9BZE9 553 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 IL26Q9NPH9 171 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 FAM153AQ9UHL3 310 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 PILRAQ9UKJ1 303 aa16.33■□□□□ 0.2
PTPRK-208ENST00000392449 ASH1LQ9NR48 2969 aaKnown RBP16.32■□□□□ 0.2
PTPRK-208ENST00000392449 TLN1Q9Y490 2541 aaKnown RBP16.32■□□□□ 0.2
PTPRK-208ENST00000392449 LOC285095A0A1B0GVY8 99 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 LILRA5A6NI73 299 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 PRR19A6NJB7 356 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 KMOO15229 486 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 UGT1A9O60656 530 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 ITGB6P18564 788 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 UGT1A6P19224 532 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 UGT1A1P22309 533 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 UGT1A4P22310 534 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 LEPRP48357 1165 aaKnown RBP16.32■□□□□ 0.2
PTPRK-208ENST00000392449 CLCNKAP51800 687 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 TFDP3Q5H9I0 405 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 PDPK2PQ6A1A2 396 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 FAM151BQ6UXP7 276 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 C11orf96Q7Z7L8 435 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 TRAPPC5Q8IUR0 188 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 TRIM48Q8IWZ4 208 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 GDAP1Q8TB36 358 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 BLOC1S5Q8TDH9 187 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 NAT14Q8WUY8 206 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 TGM7Q96PF1 710 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.32■□□□□ 0.2
PTPRK-208ENST00000392449 TRIM4Q9C037 500 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 UGT1A7Q9HAW7 530 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 UGT1A10Q9HAW8 530 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 UGT1A8Q9HAW9 530 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 RAD18Q9NS91 495 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 WDR37Q9Y2I8 494 aa16.32■□□□□ 0.2
PTPRK-208ENST00000392449 OR5K4A6NMS3 321 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 FLNBO75369 2602 aaKnown RBP16.31■□□□□ 0.2
PTPRK-208ENST00000392449 VIPP01282 170 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 XRCC1P18887 633 aaPredicted RBP16.31■□□□□ 0.2
PTPRK-208ENST00000392449 HMGCLP35914 325 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 RAB15P59190 212 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 MN1Q10571 1320 aaPredicted RBP16.31■□□□□ 0.2
PTPRK-208ENST00000392449 OLIG2Q13516 323 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 CHRNA6Q15825 494 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 TMEM26Q6ZUK4 368 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 PID1Q7Z2X4 250 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 KATNAL2Q8IYT4 538 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 RSC1A1Q92681 617 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 QKIQ96PU8 341 aaKnown RBP eCLIP16.31■□□□□ 0.24e-7■■■■■ 27
PTPRK-208ENST00000392449 GORASP1Q9BQQ3 440 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 TIMM29Q9BSF4 260 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 SPRY4Q9C004 299 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 PCDHA13Q9Y5I0 950 aa16.31■□□□□ 0.2
PTPRK-208ENST00000392449 LOC101059948A0A1B0GTJ6 334 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 GPR89AB7ZAQ6 455 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 GAPDHSO14556 408 aaPredicted RBP16.3■□□□□ 0.2
PTPRK-208ENST00000392449 KIF1CO43896 1103 aaKnown RBP16.3■□□□□ 0.2
PTPRK-208ENST00000392449 VEGFDO43915 354 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 STK17BO94768 372 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 UBXN7O94888 489 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPRK-208ENST00000392449 GPR89BP0CG08 455 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 SEPHS1P49903 392 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 CTSCP53634 463 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 HADHBP55084 474 aaKnown RBP16.3■□□□□ 0.2
PTPRK-208ENST00000392449 SH3BP2P78314 561 aa16.3■□□□□ 0.2
PTPRK-208ENST00000392449 TMEM115Q12893 351 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms