RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 MRNIPQ6NTE8 343 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 NEPROQ6NW34 567 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 UNC5AQ6ZN44 842 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 SDCCAG8Q86SQ7 713 aaPredicted RBP14.74□□□□□ -0.05
SUMO1-203ENST00000392246 GALNT13Q8IUC8 556 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 KIAA2013Q8IYS2 634 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 RBFAQ8N0V3 343 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 OTUD6BQ8N6M0 293 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 FMO2Q99518 471 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 TCEAL2Q9H3H9 227 aaPredicted RBP14.74□□□□□ -0.05
SUMO1-203ENST00000392246 C20orf96Q9NUD7 363 aaPredicted RBP14.74□□□□□ -0.05
SUMO1-203ENST00000392246 TRNAU1APQ9NX07 287 aaKnown RBP14.74□□□□□ -0.05
SUMO1-203ENST00000392246 GPSM3Q9Y4H4 160 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 PCDHGB2Q9Y5G2 931 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 WDR87Q6ZQQ6 2873 aa14.74□□□□□ -0.05
SUMO1-203ENST00000392246 PIKFYVEQ9Y2I7 2098 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 IGLV3-16A0A075B6K0 115 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 C4orf47A7E2U8 309 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 GOLGA8KD6RF30 607 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 GOLGA8TH3BQL2 631 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 GRID2O43424 1007 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 SDC3O75056 442 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 DGKAP23743 735 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 PMLP29590 882 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 TTPAP49638 278 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 ELOCQ15369 112 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 STPG1Q5TH74 334 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 PALM2Q8IXS6 379 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 LMNTD2Q8IXW0 634 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 SDR16C5Q8N3Y7 309 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 FSTL5Q8N475 847 aaPredicted RBP14.73□□□□□ -0.05
SUMO1-203ENST00000392246 RASGEF1AQ8N9B8 481 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 GPR150Q8NGU9 434 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 GABPB2Q8TAK5 448 aaPredicted RBP14.73□□□□□ -0.05
SUMO1-203ENST00000392246 CALML6Q8TD86 181 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 SAP25Q8TEE9 199 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 ZNF514Q96K75 400 aaPredicted RBP14.73□□□□□ -0.05
SUMO1-203ENST00000392246 OR2M4Q96R27 311 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 LRRC61Q9BV99 259 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 TMEM168Q9H0V1 697 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 IL1RAPL1Q9NZN1 696 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 MARCH4Q9P2E8 410 aaPredicted RBP14.73□□□□□ -0.05
SUMO1-203ENST00000392246 GPR34Q9UPC5 381 aa14.73□□□□□ -0.05
SUMO1-203ENST00000392246 ZFC3H1O60293 1989 aaKnown RBP14.73□□□□□ -0.05
SUMO1-203ENST00000392246 ASCC3Q8N3C0 2202 aaKnown RBP14.73□□□□□ -0.05
SUMO1-203ENST00000392246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.72□□□□□ -0.05
SUMO1-203ENST00000392246 NEMP2A6NFY4 417 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 SCAMP1O15126 338 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 PFDN6O15212 129 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 KMOO15229 486 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 AQP9O43315 295 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 ATP1B2P14415 290 aaPredicted RBP14.72□□□□□ -0.05
SUMO1-203ENST00000392246 ECHS1P30084 290 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 NSG1P42857 185 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 MAGEA4P43358 317 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 LIMK1P53667 647 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 ARHGAP8P85298 464 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 B4GALNT1Q00973 533 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 FRG1Q14331 258 aaKnown RBP14.72□□□□□ -0.05
SUMO1-203ENST00000392246 SEMA3AQ14563 771 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 UAP1L1Q3KQV9 507 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 TMEM220Q6QAJ8 160 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 PACS1Q6VY07 963 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 LRRTM4Q86VH4 590 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 KCNMB4Q86W47 210 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 ZNF548Q8NEK5 533 aaPredicted RBP14.72□□□□□ -0.05
SUMO1-203ENST00000392246 GSDMBQ8TAX9 411 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 LMX1AQ8TE12 382 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 TCF12Q99081 682 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 BOCQ9BWV1 1114 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 CAAP1Q9H8G2 361 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 PLAC1Q9HBJ0 212 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 NFU1Q9UMS0 254 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 CSNK1G3Q9Y6M4 447 aa14.72□□□□□ -0.05
SUMO1-203ENST00000392246 NDUFS3O75489 264 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 ZNF7P17097 686 aaPredicted RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 OGNP20774 298 aaKnown RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 CTSCP53634 463 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 ILF3Q12906 894 aaKnown RBP eCLIP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 C1orf61Q13536 156 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 LRP8Q14114 963 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 SMAD1Q15797 465 aaKnown RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 HSP90AA5PQ58FG0 334 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 RNF187Q5TA31 235 aaPredicted RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 CRTC3Q6UUV7 619 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 DBX2Q6ZNG2 339 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 DET1Q7L5Y6 550 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 KANSL1Q7Z3B3 1105 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 LDB1Q86U70 411 aaPredicted RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 ALYREFQ86V81 257 aaKnown RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 GKN2Q86XP6 184 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 GATAD2AQ86YP4 633 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 CILP2Q8IUL8 1156 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 TRAPPC5Q8IUR0 188 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 SLC25A45Q8N413 288 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 PNPLA1Q8N8W4 532 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 EIF1ADQ8N9N8 165 aaKnown RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 GPBAR1Q8TDU6 330 aa14.71□□□□□ -0.05
SUMO1-203ENST00000392246 SCG3Q8WXD2 468 aaKnown RBP14.71□□□□□ -0.05
SUMO1-203ENST00000392246 UBXN4Q92575 508 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms