RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CDC73Q6P1J9 531 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 LDHAL6AQ6ZMR3 332 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 QSOX2Q6ZRP7 698 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 MFSD6Q6ZSS7 791 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 HIST3H2AQ7L7L0 130 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PIWIL4Q7Z3Z4 852 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ISCA2Q86U28 154 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 CCDC190Q86UF4 302 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 APLFQ8IW19 511 aaPredicted RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GPALPP1Q8IXQ4 340 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF440Q8IYI8 595 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PM20D2Q8IYS1 436 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 RAB42Q8N4Z0 105 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GBGT1Q8N5D6 347 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC5A8Q8N695 610 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 C1orf52Q8N6N3 182 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ANKRD52Q8NB46 1076 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PPFIBP2Q8ND30 876 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ACVR1CQ8NER5 493 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 OR5R1Q8NH85 324 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 FAM222BQ8WU58 562 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 HERVK_113Q902F9 699 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 HVCN1Q96D96 273 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PABPC5Q96DU9 382 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 RNF125Q96EQ8 232 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GMPPAQ96IJ6 420 aaPredicted RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 MAGED4Q96JG8 741 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 UBXN10Q96LJ8 280 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PSD2Q9BQI7 771 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 TKTL2Q9H0I9 626 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 P2RY12Q9H244 342 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 TTYH1Q9H313 450 aaPredicted RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 BRF2Q9HAW0 419 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 SEBOXQ9HB31 216 aaPredicted RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 TRPC7Q9HCX4 862 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 LTB4R2Q9NPC1 389 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 COQ3Q9NZJ6 369 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 CWC15Q9P013 229 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 DBNLQ9UJU6 430 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ACAD8Q9UKU7 415 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ARHGAP26Q9UNA1 814 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 EXOGQ9Y2C4 368 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 MOB4Q9Y3A3 225 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 RABGAP1Q9Y3P9 1069 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PCDHGB3Q9Y5G1 929 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM237AA0A1B0GTK4 181 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MED19A0JLT2 244 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CTAGE9A4FU28 777 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM90A26D6RGX4 464 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 PLOD2O00469 737 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MAP2K7O14733 419 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 SORBS2O94875 1100 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 SEC31AO94979 1220 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 NKX2-2O95096 273 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CSPG5O95196 566 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CCNDBP1O95273 360 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 LIPFP07098 398 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 SPARCP09486 303 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CTAGE8P0CG41 777 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM157CP0CG43 387 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 LIFP15018 202 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 GNB3P16520 340 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 IL7RP16871 459 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF26P17031 533 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ANXA7P20073 488 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 NR1D1P20393 614 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MSH3P20585 1137 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CBLP22681 906 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 NFKBIAP25963 317 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CNTFP26441 200 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 APOBEC1P41238 236 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 PIP4K2AP48426 406 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 RPL7AP62424 266 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MRPS34P82930 218 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CDC16Q13042 620 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 TBX2Q13207 712 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 TMEM187Q14656 261 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 TEAD2Q15562 447 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ZRSR2Q15696 482 aaKnown RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ZSCAN23Q3MJ62 389 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 FFAR4Q5NUL3 377 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 WLSQ5T9L3 541 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 BSPRYQ5W0U4 402 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF280DQ6N043 979 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM53AQ6NSI3 398 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 GALNT5Q7Z7M9 940 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 CTAGE4Q8IX94 777 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 TEX11Q8IYF3 940 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 RNF168Q8IYW5 571 aaPredicted RBP1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 LSMEM2Q8N112 164 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 GCSAMQ8N6F7 178 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF611Q8N823 705 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF614Q8N883 585 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 NIPA2Q8N8Q9 360 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 MAPK1IP1LQ8NDC0 245 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 OR14L1PQ8NHC6 308 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 OR2T6Q8NHC8 308 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 HMGCLL1Q8TB92 370 aa1.21□□□□□ -2.22
SNORD28B-201ENST00000390993 HM13Q8TCT9 377 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms