RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PERPQ96FX8 193 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 ADPRHL2Q9NX46 363 aa3.06□□□□□ -1.92
TRAV40-201ENST00000390467 PRAG1Q86YV5 1406 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 JRKO75564 520 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 SEC14L2O76054 403 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 IGLV1-44P01699 117 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 NR2C2P49116 596 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 CLK1P49759 484 aaKnown RBP3.05□□□□□ -1.92
TRAV40-201ENST00000390467 RARSP54136 660 aaKnown RBP3.05□□□□□ -1.92
TRAV40-201ENST00000390467 MLLT10P55197 1068 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 PDE1CQ14123 709 aaPredicted RBP3.05□□□□□ -1.92
TRAV40-201ENST00000390467 DHX8Q14562 1220 aaKnown RBP3.05□□□□□ -1.92
TRAV40-201ENST00000390467 ACAD10Q6JQN1 1059 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF790Q6PG37 636 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 PACS1Q6VY07 963 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 ART5Q96L15 291 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 POLR1BQ9H9Y6 1135 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 RANGRFQ9HD47 186 aaPredicted RBP3.05□□□□□ -1.92
TRAV40-201ENST00000390467 DLGAP2Q9P1A6 1054 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 DNAJB4Q9UDY4 337 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 CACNG5Q9UF02 275 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 B3GALT5Q9Y2C3 310 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 CRYL1Q9Y2S2 319 aa3.05□□□□□ -1.92
TRAV40-201ENST00000390467 A0A0G2JLW4 131 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 A6NLC8 198 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 ANKRD66B4E2M5 251 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 PLPP2O43688 288 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 TFAP2AP05549 437 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 LIPFP07098 398 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 KRT19P08727 400 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 IGHV4-38-2P0DP08 117 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 UBL4AP11441 157 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF26P17031 533 aaPredicted RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 XBP1P17861 261 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 PPM1FP49593 454 aaPredicted RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 MMP15P51511 669 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 LUMP51884 338 aaPredicted RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 IRX1P78414 480 aaPredicted RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 TMEM187Q14656 261 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 DPCR1Q3MIW9 517 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 ZFP69Q49AA0 526 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 CYP20A1Q6UW02 462 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 MFSD6Q6ZSS7 791 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF354CQ86Y25 554 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 CPXCR1Q8N123 301 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 SPEM1Q8N4L4 309 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 SLC38A9Q8NBW4 561 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 TMEM116Q8NCL8 245 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 PRMT6Q96LA8 375 aaPredicted RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 WDFY2Q96P53 400 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 ATOH8Q96SQ7 321 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 EGFL8Q99944 293 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 SIL1Q9H173 461 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 MAGIXQ9H6Y5 334 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 APOBEC3GQ9HC16 384 aaKnown RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 ZBTB20Q9HC78 741 aaPredicted RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 SIX2Q9NPC8 291 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 C2orf42Q9NWW7 574 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 TAS2R10Q9NYW0 307 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 PTTG2Q9NZH5 202 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 CWC15Q9P013 229 aaKnown RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 TMEM181Q9P2C4 612 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 PDP2Q9P2J9 529 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 SLC13A4Q9UKG4 626 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 PYGO1Q9Y3Y4 419 aa3.04□□□□□ -1.92
TRAV40-201ENST00000390467 TMEM184BQ9Y519 407 aaPredicted RBP3.04□□□□□ -1.92
TRAV40-201ENST00000390467 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 FLT1P17948 1338 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 KANSL1LA0AUZ9 987 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 A6NL46 340 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 MAGEB17A8MXT2 336 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 H3BQ06 376 aaPredicted RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 BUD23O43709 281 aaKnown RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 GNAZP19086 355 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 HRH2P25021 359 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 TAS2R40P59535 323 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 RPL7AP62424 266 aaKnown RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 MRPS34P82930 218 aaKnown RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 CSTF3Q12996 717 aaKnown RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 GSTA5Q7RTV2 222 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 SLC5A8Q8N695 610 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 C1orf52Q8N6N3 182 aaKnown RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 EMC1Q8N766 993 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 FAM149B1Q96BN6 582 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 ZNF653Q96CK0 615 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 MAP7D2Q96T17 732 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 SEMA3CQ99985 751 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 RANBP17Q9H2T7 1088 aaKnown RBP3.03□□□□□ -1.92
TRAV40-201ENST00000390467 RAD21L1Q9H4I0 556 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 PDZD7Q9H5P4 517 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 ERVMER34-1Q9H9K5 563 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 FGF22Q9HCT0 170 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 SLC38A7Q9NVC3 462 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 MTMR10Q9NXD2 777 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 FBXW11Q9UKB1 542 aa3.03□□□□□ -1.92
TRAV40-201ENST00000390467 DISP3Q9P2K9 1392 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 H0YIN7 160 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 MAP2K7O14733 419 aa3.02□□□□□ -1.93
TRAV40-201ENST00000390467 CLIC2O15247 247 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms