RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 SSR2P43308 183 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 CHRNA6Q15825 494 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 CYP1B1Q16678 543 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 FBXW8Q8N3Y1 598 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 OSCP1Q8WVF1 389 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 PLD4Q96BZ4 506 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 MIEF2Q96C03 454 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 TLL2Q9Y6L7 1015 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 PIRO00625 290 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 OR1F1O43749 312 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 FUT4P22083 530 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 POLR2JP52435 117 aaKnown RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 PLA2G16P53816 162 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 JPH3Q8WXH2 748 aaPredicted RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 RIOK2Q9BVS4 552 aaKnown RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 KLHL28Q9NXS3 571 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 OR10H1Q9Y4A9 318 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 LTBP3Q9NS15 1303 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 SLC20A2Q08357 652 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 PPIDQ08752 370 aaKnown RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 C2orf80Q0P641 193 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 DHDDSQ86SQ9 333 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 IFNLR1Q8IU57 520 aaPredicted RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 BRINP2Q9C0B6 783 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 LRTM1Q9HBL6 345 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 TRIM38O00635 465 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 MYCLP1P12525 358 aaPredicted RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 NEK2P51955 445 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 LBX1P52954 281 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 RAD23AP54725 363 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 HMGCS1Q01581 520 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 TRIM25Q14258 630 aaKnown RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 POF1BQ8WVV4 589 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 IPCEF1Q8WWN9 437 aaPredicted RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 KXD1Q9BQD3 176 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 BATF3Q9NR55 127 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 PDP2Q9P2J9 529 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 VPS51Q9UID3 782 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 SGTAO43765 313 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 ATP6V1C1P21283 382 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 ATP6V0D1P61421 351 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 LYPLAL1Q5VWZ2 237 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 TAF8Q7Z7C8 310 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 PHYKPLQ8IUZ5 450 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 OFCC1Q8IZS5 231 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 FAM13CQ8NE31 585 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 RP9Q8TA86 221 aaKnown RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 BRSK1Q8TDC3 778 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 PPCDCQ96CD2 204 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 TMLHEQ9NVH6 421 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 SLX4Q8IY92 1834 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 TRIM43BA6NCK2 446 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 DEAF1O75398 565 aaPredicted RBP14.44□□□□□ -0.1
PSME4-201ENST00000389993 AHSGP02765 367 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 POU2F1P14859 743 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 NR4A1P22736 598 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 MTPNP58546 118 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 CCNYL2Q5T2Q4 361 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 RAD21L1Q9H4I0 556 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 KCTD5Q9NXV2 234 aa14.44□□□□□ -0.1
PSME4-201ENST00000389993 LAMA4Q16363 1823 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 STX16-NPEPL1H3BU86 382 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 NFATC1O95644 943 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 PTNP21246 168 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 HADHBP55084 474 aaKnown RBP14.43□□□□□ -0.1
PSME4-201ENST00000389993 USP46P62068 366 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 CHIT1Q13231 466 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 MFSD5Q6N075 450 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 BEND7Q8N7W2 519 aaPredicted RBP14.43□□□□□ -0.1
PSME4-201ENST00000389993 TLCD1Q96CP7 247 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 HAPLN3Q96S86 360 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 SIKE1Q9BRV8 207 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 YIPF4Q9BSR8 244 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.43□□□□□ -0.11e-7■■■■□ 25.9
PSME4-201ENST00000389993 RASSF1Q9NS23 344 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 CAPN8A6NHC0 703 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 COCHO43405 550 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 VEGFBP49765 207 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 SULT2A1Q06520 285 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 FAM9CQ8IZT9 166 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 ATP6V1C2Q8NEY4 427 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 ANKRD49Q8WVL7 239 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 KAT2AQ92830 837 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 BADQ92934 168 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 RAB23Q9ULC3 237 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 VPS4AQ9UN37 437 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 FPGTO14772 594 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 MMP20O60882 483 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 POP4O95707 220 aaKnown RBP14.43□□□□□ -0.1
PSME4-201ENST00000389993 TSHRP16473 764 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 C21orf59P57076 290 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 ECT2LQ008S8 904 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 HNRNPDQ14103 355 aaKnown RBP14.43□□□□□ -0.1
PSME4-201ENST00000389993 KCNJ11Q14654 390 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 UBXN11Q5T124 520 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 RAD51AP1Q96B01 352 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 OSBPL7Q9BZF2 842 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 TBC1D23Q9NUY8 699 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 C10orf71Q711Q0 1435 aa14.43□□□□□ -0.1
PSME4-201ENST00000389993 FCGR1AP12314 374 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms