RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 COPS8Q99627 209 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 THAP1Q9NVV9 213 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 ZDHHC3Q9NYG2 299 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 SERGEFQ9UGK8 458 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 PCDHB1Q9Y5F3 818 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 A0A0G2JND7 137 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 CDC7O00311 574 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 SLC25A14O95258 325 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 TSPAN12O95859 305 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 RBP1P09455 135 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 CD72P21854 359 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 RPS3P23396 243 aaKnown RBP eCLIP12.06□□□□□ -0.481e-9■■□□□ 12.7
SPTBN1-203ENST00000389980 DRD3P35462 400 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 SLC26A3P40879 764 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 KPNA2P52292 529 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 NAGLUP54802 743 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 ILF2Q12905 390 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 CAMK2GQ13555 558 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 KHDC1Q4VXA5 237 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 TMEM196Q5HYL7 178 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 LYPLAL1Q5VWZ2 237 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 LIPMQ5VYY2 423 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 ZDHHC20Q5W0Z9 365 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 TRPM8Q7Z2W7 1104 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 IL17RCQ8NAC3 791 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 LINGO1Q96FE5 620 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 C7orf26Q96N11 449 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 SHCBP1LQ9BZQ2 653 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 SYTL2Q9HCH5 934 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 GNPTGQ9UJJ9 305 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 MID2Q9UJV3 735 aa12.06□□□□□ -0.48
SPTBN1-203ENST00000389980 NPEPPSL1A6NEC2 478 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 A8MT66 165 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 K7ESM1 405 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 WNT9AO14904 365 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 SYNCRIPO60506 623 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 ADAM23O75077 832 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 CHRNGP07510 517 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 AKT1P31749 480 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 DCDC1P59894 354 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 ABCE1P61221 599 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 IRX1P78414 480 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 CST6Q15828 149 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 PIP5KL1Q5T9C9 394 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 CRLF3Q8IUI8 442 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 CCNYL1Q8N7R7 359 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 AGR3Q8TD06 166 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 C10orf82Q8WW14 230 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 AP2M1Q96CW1 435 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 COQ10AQ96MF6 247 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 PHF7Q9BWX1 381 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 TRIM55Q9BYV6 548 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 MKRN2Q9H000 416 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 RSPH9Q9H1X1 276 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 KCNK13Q9HB14 408 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 PNPOQ9NVS9 261 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 KLHL14Q9P2G3 628 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 DNAJC16Q9Y2G8 782 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 ARL2BPQ9Y2Y0 163 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 DHRS7Q9Y394 339 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 COMMD10Q9Y6G5 202 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 UBXN8O00124 270 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 INPP4BO15327 924 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 RECQL5O94762 991 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 UBOX5O94941 541 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 KLF8O95600 359 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 TROVE2P10155 538 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 C6P13671 934 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 ATP5F1P24539 256 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 GRK2P25098 689 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 NTSR1P30989 418 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 NSG1P42857 185 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 IL2P60568 153 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 ELP6Q0PNE2 266 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 TSNQ15631 228 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 FBXO48Q5FWF7 155 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 RALGPS2Q86X27 583 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 TRAM1L1Q8N609 369 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 DTD2Q96FN9 168 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 TMEM237Q96Q45 408 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 DERL2Q9GZP9 239 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 KLC4Q9NSK0 619 aa12.05□□□□□ -0.48
SPTBN1-203ENST00000389980 A0A1W2PP55 124 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 BTN3A1O00481 513 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 LZTS3O60299 673 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 RASSF9O75901 435 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 COL9A1P20849 921 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 SKIV2L2P42285 1042 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 COPAP53621 1224 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 ZNF284Q2VY69 593 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 LACTB2Q53H82 288 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 FAM46CQ5VWP2 391 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 FAM219BQ5XKK7 198 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 MACC1Q6ZN28 852 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 PIWIL4Q7Z3Z4 852 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 NKAPQ8N5F7 415 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 ULK4Q96C45 1275 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms