RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 TSPAN33Q86UF1 283 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 NXPE1Q8N323 547 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 KYQ8NBH2 561 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 HMGCLL1Q8TB92 370 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 ZSWIM3Q96MP5 696 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 NSUN5Q96P11 429 aaKnown RBP19.03■□□□□ 0.64
GMDS-201ENST00000380805 PLEKHG4BQ96PX9 1271 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 LINC00597Q9H2U6 94 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 MID1IP1Q9NPA3 183 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 KLHL42Q9P2K6 505 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 UBDO15205 165 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 MLYCDO95822 493 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 TSPAN8P19075 237 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 LHCGRP22888 699 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 ACADVLP49748 655 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 TBL3Q12788 808 aaKnown RBP19.03■□□□□ 0.64
GMDS-201ENST00000380805 MAPRE2Q15555 327 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 CHRNA6Q15825 494 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 ACCSLQ4AC99 568 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 C1orf146Q5VVC0 180 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 LRRC66Q68CR7 880 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 PTRHD1Q6GMV3 140 aaKnown RBP19.03■□□□□ 0.64
GMDS-201ENST00000380805 AAGABQ6PD74 315 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 SBSNQ6UWP8 590 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 GPSM1Q86YR5 675 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 FBXW8Q8N3Y1 598 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 OR2A12Q8NGT7 310 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 CCDC97Q96F63 343 aaPredicted RBP19.03■□□□□ 0.64
GMDS-201ENST00000380805 NUSAP1Q9BXS6 441 aaKnown RBP19.03■□□□□ 0.64
GMDS-201ENST00000380805 CIPCQ9C0C6 399 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 NKX2-4Q9H2Z4 354 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 SLCO3A1Q9UIG8 710 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 FIS1Q9Y3D6 152 aa19.03■□□□□ 0.64
GMDS-201ENST00000380805 PLXNA2O75051 1894 aa19.02■□□□□ 0.64
GMDS-201ENST00000380805 SZT2Q5T011 3432 aa19.02■□□□□ 0.64
GMDS-201ENST00000380805 PIKFYVEQ9Y2I7 2098 aa19.02■□□□□ 0.64
GMDS-201ENST00000380805 IGLV3-16A0A075B6K0 115 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 TSPAN11A1L157 253 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 IQCF5A8MTL0 148 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 H0Y3Z8 333 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 PPP6CO00743 305 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 CSPG5O95196 566 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 CHRM1P11229 460 aaPredicted RBP19.02■□□□□ 0.63
GMDS-201ENST00000380805 TGFBIQ15582 683 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 TMEM215Q68D42 235 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 GRASPQ7Z6J2 395 aaPredicted RBP19.02■□□□□ 0.63
GMDS-201ENST00000380805 PHYKPLQ8IUZ5 450 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 PGAM4Q8N0Y7 254 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 GPR26Q8NDV2 337 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 TRPC4APQ8TEL6 797 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 FRS2Q8WU20 508 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 TWIST2Q8WVJ9 160 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 JADE3Q92613 823 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 MRGPRX3Q96LB0 322 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 BOCQ9BWV1 1114 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 UTP6Q9NYH9 597 aaKnown RBP19.02■□□□□ 0.63
GMDS-201ENST00000380805 CRLS1Q9UJA2 301 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 ERVW-1Q9UQF0 538 aa19.02■□□□□ 0.63
GMDS-201ENST00000380805 E2F3O00716 465 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 TBX10O75333 385 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 FKBP6O75344 327 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 ESRRBO95718 433 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 CEBPBP17676 345 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 PTDSS1P48651 473 aaKnown RBP19.01■□□□□ 0.63
GMDS-201ENST00000380805 NUDT2P50583 147 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 PTSQ03393 145 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 SLC34A1Q06495 639 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 PCBP2Q15366 365 aaKnown RBP eCLIP19.01■□□□□ 0.638e-7■■■□□ 16.4
GMDS-201ENST00000380805 PPP1R3AQ16821 1122 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 GPRC6AQ5T6X5 926 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 BRAT1Q6PJG6 821 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 Q6ZVU0 165 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 DSELQ8IZU8 1212 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 PAF1Q8N7H5 531 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 PDPRQ8NCN5 879 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 DTX3LQ8TDB6 740 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 RCN3Q96D15 328 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 MARK4Q96L34 752 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 C3orf30Q96M34 536 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 ZDHHC6Q9H6R6 413 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 BRD9Q9H8M2 597 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 EFCAB1Q9HAE3 211 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 G3BP2Q9UN86 482 aaKnown RBP19.01■□□□□ 0.63
GMDS-201ENST00000380805 HCFC2Q9Y5Z7 792 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 PRSS21Q9Y6M0 314 aa19.01■□□□□ 0.63
GMDS-201ENST00000380805 KIF26AQ9ULI4 1882 aaPredicted RBP19■□□□□ 0.63
GMDS-201ENST00000380805 VPS4BO75351 444 aa19■□□□□ 0.63
GMDS-201ENST00000380805 MRPL19P49406 292 aaKnown RBP19■□□□□ 0.63
GMDS-201ENST00000380805 RGS4P49798 205 aa19■□□□□ 0.63
GMDS-201ENST00000380805 FOXA1P55317 472 aa19■□□□□ 0.63
GMDS-201ENST00000380805 POLR2LP62875 67 aaKnown RBP19■□□□□ 0.63
GMDS-201ENST00000380805 CMPK2Q5EBM0 449 aa19■□□□□ 0.63
GMDS-201ENST00000380805 GDPD4Q6W3E5 623 aa19■□□□□ 0.63
GMDS-201ENST00000380805 EFL1Q7Z2Z2 1120 aaKnown RBP19■□□□□ 0.63
GMDS-201ENST00000380805 LKAAEAR1Q8TD35 194 aa19■□□□□ 0.63
GMDS-201ENST00000380805 SAMD11Q96NU1 681 aa19■□□□□ 0.63
GMDS-201ENST00000380805 TUBB1Q9H4B7 451 aa19■□□□□ 0.63
GMDS-201ENST00000380805 ZDHHC3Q9NYG2 299 aa19■□□□□ 0.63
GMDS-201ENST00000380805 MSRAQ9UJ68 235 aa19■□□□□ 0.63
GMDS-201ENST00000380805 POMPQ9Y244 141 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms