RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 CDH4P55283 916 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 NUP107P57740 925 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 C5orf22Q49AR2 442 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 ATP6AP1LQ52LC2 224 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 NANOGP8Q6NSW7 305 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 ABRAXAS1Q6UWZ7 409 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 ADAMTS16Q8TE57 1224 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 EEF1AKMT1Q8WVE0 214 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 LINGO1Q96FE5 620 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 EXOC2Q96KP1 924 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 SLC30A3Q99726 388 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 RETREG1Q9H6L5 497 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 NANOGQ9H9S0 305 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 LIN28AQ9H9Z2 209 aaKnown RBP16.17■□□□□ 0.18
VPS16-203ENST00000380469 SMPD3Q9NY59 655 aaPredicted RBP16.17■□□□□ 0.18
VPS16-203ENST00000380469 CIDEBQ9UHD4 219 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 ZNF225Q9UK10 706 aa16.17■□□□□ 0.18
VPS16-203ENST00000380469 ZFP37Q9Y6Q3 630 aaPredicted RBP16.17■□□□□ 0.18
VPS16-203ENST00000380469 E5RI56 91 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 HTR1EP28566 365 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 SLC6A4P31645 630 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 MC4RP32245 332 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 SOX11P35716 441 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 CAPGP40121 348 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 RPS9P46781 194 aaKnown RBP16.16■□□□□ 0.18
VPS16-203ENST00000380469 RGRP47804 291 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 MRPL58Q14197 206 aaKnown RBP16.16■□□□□ 0.18
VPS16-203ENST00000380469 TIGD2Q4W5G0 525 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 CST9Q5W186 159 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 UGT3A1Q6NUS8 523 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 KIAA2013Q8IYS2 634 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 LPCAT1Q8NF37 534 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 OSCP1Q8WVF1 389 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 TMEM74Q96NL1 305 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 EIF2B4Q9UI10 523 aaKnown RBP16.16■□□□□ 0.18
VPS16-203ENST00000380469 CROCCQ5TZA2 2017 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 NIPSNAP2O75323 286 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 OR4F21O95013 312 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 C1RP00736 705 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 CD9P21926 228 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 PSMA3P25788 255 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 SLC11A2P49281 568 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 EMX2Q04743 252 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 PRKG2Q13237 762 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 ZRANB3Q5FWF4 1079 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 C6orf136Q5SQH8 315 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 PSAPL1Q6NUJ1 521 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 CDYL2Q8N8U2 506 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 OR2T11Q8NH01 316 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 MAGEE2Q8TD90 523 aaPredicted RBP16.16■□□□□ 0.18
VPS16-203ENST00000380469 ESAMQ96AP7 390 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 BIRC7Q96CA5 298 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 B3GALT6Q96L58 329 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 ZNF382Q96SR6 550 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 BDH2Q9BUT1 245 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 ADGRE3Q9BY15 652 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 SLAMF8Q9P0V8 285 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 FKBPLQ9UIM3 349 aa16.16■□□□□ 0.18
VPS16-203ENST00000380469 AGO1Q9UL18 857 aaKnown RBP16.16■□□□□ 0.18
VPS16-203ENST00000380469 GBF1Q92538 1859 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 MTMR11A4FU01 709 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 ZNF701M0R085 212 aaPredicted RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 OR1I1O60431 355 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 TSPAN12O95859 305 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 ENO2P09104 434 aaPredicted RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 ARL1P40616 181 aaPredicted RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 RANBP1P43487 201 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 PATL1Q86TB9 770 aaKnown RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 HID1Q8IV36 788 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 PIANPQ8IYJ0 282 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 GIPC2Q8TF65 315 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 FBXL20Q96IG2 436 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 VPS50Q96JG6 964 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 NSMCE3Q96MG7 304 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 SEPHS2Q99611 448 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 TDRD1Q9BXT4 1180 aaKnown RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 LRRC3Q9BY71 257 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 NACA2Q9H009 215 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 MUC3BQ9H195 1237 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 PREBQ9HCU5 417 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 SARS2Q9NP81 518 aaKnown RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 DNMT3LQ9UJW3 386 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 RAI2Q9Y5P3 530 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 CENPFP49454 3210 aa16.15■□□□□ 0.18
VPS16-203ENST00000380469 ZFC3H1O60293 1989 aaKnown RBP16.15■□□□□ 0.18
VPS16-203ENST00000380469 TRIM64A6NGJ6 449 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 E2F3O00716 465 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 STX7O15400 261 aaKnown RBP16.14■□□□□ 0.18
VPS16-203ENST00000380469 PRLP01236 227 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 ZDHHC11BP0C7U3 371 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 CLCN4P51793 760 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 HK3P52790 923 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 ADARP55265 1226 aaKnown RBP16.14■□□□□ 0.18
VPS16-203ENST00000380469 FAM189BP81408 668 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 GPR17Q13304 367 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 AARS2Q5JTZ9 985 aaKnown RBP16.14■□□□□ 0.18
VPS16-203ENST00000380469 CTSL3PQ5NE16 218 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 LZICQ8WZA0 190 aa16.14■□□□□ 0.18
VPS16-203ENST00000380469 ISOC1Q96CN7 298 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms