RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 LETMD1Q6P1Q0 360 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 CANT1Q8WVQ1 401 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 TRMT2BQ96GJ1 504 aaKnown RBP13.24□□□□□ -0.29
CCDC3-202ENST00000378839 ASB2Q96Q27 587 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 HGH1Q9BTY7 390 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 SLC2A11Q9BYW1 496 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 A8MX80 341 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 TIPRLO75663 272 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 ESRRBO95718 433 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 SOD2P04179 222 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 ITGB6P18564 788 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 HTR6P50406 440 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 TGFBIQ15582 683 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 CDKN3Q16667 212 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 LIN52Q52LA3 116 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 FAM151BQ6UXP7 276 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 Q6ZNB5 142 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 Q6ZSR9 355 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 METTL25Q8N6Q8 603 aa13.24□□□□□ -0.29
CCDC3-202ENST00000378839 NOL11Q9H8H0 719 aaKnown RBP13.24□□□□□ -0.29
CCDC3-202ENST00000378839 TRMT6Q9UJA5 497 aaKnown RBP13.24□□□□□ -0.29
CCDC3-202ENST00000378839 STX16O14662 325 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 VPS26AO75436 327 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 MATN4O95460 622 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 TTPAP49638 278 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 RPL26P61254 145 aaKnown RBP13.23□□□□□ -0.29
CCDC3-202ENST00000378839 STX1BP61266 288 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 RHOAP61586 193 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 RABL3Q5HYI8 236 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 SAMD4BQ5PRF9 694 aaKnown RBP13.23□□□□□ -0.29
CCDC3-202ENST00000378839 SBSNQ6UWP8 590 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 NKAPQ8N5F7 415 aaKnown RBP13.23□□□□□ -0.29
CCDC3-202ENST00000378839 CLDN19Q8N6F1 224 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 KCNJ9Q92806 393 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 DUS3LQ96G46 650 aaKnown RBP13.23□□□□□ -0.29
CCDC3-202ENST00000378839 CEP295NLQ96MC4 621 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 DEFB118Q96PH6 123 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 TRAPPC9Q96Q05 1148 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 UHRF1Q96T88 793 aaPredicted RBP13.23□□□□□ -0.29
CCDC3-202ENST00000378839 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 APPL1Q9UKG1 709 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 RNF11Q9Y3C5 154 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 PCDHA9Q9Y5H5 950 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 PLOD2O00469 737 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 SOX11P35716 441 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 GRIA3P42263 894 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 IL2P60568 153 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 RBBP7Q16576 425 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 GPSM1Q86YR5 675 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 SPPL2CQ8IUH8 684 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
CCDC3-202ENST00000378839 CDYL2Q8N8U2 506 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 TOP1MTQ969P6 601 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 ROPN1LQ96C74 230 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 LRRC58Q96CX6 371 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 GBP5Q96PP8 586 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 AIG1Q9NVV5 245 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 EVLQ9UI08 416 aaPredicted RBP13.23□□□□□ -0.29
CCDC3-202ENST00000378839 RAB26Q9ULW5 256 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 SNX13Q9Y5W8 968 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 OBSL1O75147 1896 aa13.23□□□□□ -0.29
CCDC3-202ENST00000378839 OR7A17O14581 309 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 CYBBP04839 570 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 CKMT2P17540 419 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 UGT1A1P22309 533 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 UGT1A4P22310 534 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 OXTRP30559 389 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 SLC7A1P30825 629 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 UGT1A3P35503 534 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 UGT1A5P35504 534 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 CLCN4P51793 760 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 DHFR2Q86XF0 187 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 CIB1Q99828 191 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 CPQQ9Y646 472 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 PGLSO95336 258 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 TFAP2AP05549 437 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 HMGCLP35914 325 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 CYP4F8P98187 520 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 IKBKEQ14164 716 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 INO80DQ53TQ3 878 aaPredicted RBP13.22□□□□□ -0.29
CCDC3-202ENST00000378839 OGFOD2Q6N063 350 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 SFRP1Q8N474 314 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 MINDY1Q8N5J2 469 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 GRIN3AQ8TCU5 1115 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 TMEM74Q96NL1 305 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 SPATA16Q9BXB7 569 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 TNKS2Q9H2K2 1166 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 CD274Q9NZQ7 290 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 NDUFAF1Q9Y375 327 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 GOLGA8CPA6NN73 597 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 SOCS2O14508 198 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 TAPBPO15533 448 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 RSL1D1O76021 490 aaKnown RBP13.22□□□□□ -0.29
CCDC3-202ENST00000378839 FESP07332 822 aa13.22□□□□□ -0.29
CCDC3-202ENST00000378839 UROSP10746 265 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms