RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 COX7A2P14406 83 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 FASP25445 335 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 HPCAP84074 193 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 VAC14Q08AM6 782 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CHRNA6Q15825 494 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 LSM12Q3MHD2 195 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CDHR3Q6ZTQ4 885 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 RTN4RL1Q86UN2 441 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CFAP206Q8IYR0 622 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC39A11Q8N1S5 342 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TOP1MTQ969P6 601 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 RNF145Q96MT1 663 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 KLHL4Q9C0H6 718 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 LRMDAQ9H2I8 198 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF556Q9HAH1 456 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CHCHD3Q9NX63 227 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 LEF1Q9UJU2 399 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 MTF2Q9Y483 593 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 RFX3P48380 749 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 MYLK3Q32MK0 819 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 C2orf27AQ580R0 203 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 OTUD3Q5T2D3 398 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 WLSQ5T9L3 541 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 C6orf89Q6UWU4 347 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 GK5Q6ZS86 529 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 MTSS1LQ765P7 747 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 PHYKPLQ8IUZ5 450 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CELF5Q8N6W0 485 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 BHLHE22Q8NFJ8 381 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 OXSMQ9NWU1 459 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TRPC4Q9UBN4 977 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 C9JVG2 144 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 AHCYL1O43865 530 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 NRP2O60462 931 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 DLX3O60479 287 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CTSEP14091 401 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 IDO1P14902 403 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 GLDCP23378 1020 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 DDX6P26196 483 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 HTR1BP28222 390 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 NIPAL4Q0D2K0 466 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TP53BP2Q13625 1128 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 AP5B1Q2VPB7 878 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 GPR33Q49SQ1 333 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CILP2Q8IUL8 1156 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 KHSRPQ92945 711 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 IRF7Q92985 503 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 MAGED4Q96JG8 741 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TSSK3Q96PN8 268 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 CCDC3Q9BQI4 270 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 IMP3Q9NV31 184 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 OR4F21O95013 312 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 ALDOAP04075 364 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 ASLP04424 464 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 ADH5P11766 374 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 IDH3AP50213 366 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 FAM26DQ5JW98 314 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 TIFABQ6ZNK6 161 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 PLD6Q8N2A8 252 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 WFIKKN2Q8TEU8 576 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 C10orf82Q8WW14 230 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 OTUB1Q96FW1 271 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 EBF3Q9H4W6 596 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 PHPT1Q9NRX4 125 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 INVSQ9Y283 1065 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 SPACA6W5XKT8 324 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 STK19P49842 368 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC7A2P52569 658 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 PGGT1BP53609 377 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 PITRM1Q5JRX3 1037 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 C2orf73Q8N5S3 287 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 GDPD5Q8WTR4 605 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 SPAG4Q9NPE6 437 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 LRATO95237 230 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 CTSAP10619 480 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 BMPR1AP36894 532 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 GRIA3P42263 894 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 WDR5P61964 334 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 TGM3Q08188 693 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 MGAT3Q09327 533 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 PLA2G4EQ3MJ16 856 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 C22orf39Q6P5X5 142 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 TMEM220Q6QAJ8 160 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 CLSTN3Q9BQT9 956 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 CCDC28BQ9BUN5 200 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 DNAJC28Q9NX36 388 aa14.05□□□□□ -0.16
SHROOM1-203ENST00000378679 A0A0J9YYE9 177 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 CACNB4O00305 520 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC28A1O00337 649 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 PAPSS2O95340 614 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 CAPN1P07384 714 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 GDI1P31150 447 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 CD68P34810 354 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 MAPK9P45984 424 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 TRAF2Q12933 501 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 PDGFRLQ15198 375 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 FAM98BQ52LJ0 330 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 LPCAT4Q643R3 524 aa14.04□□□□□ -0.16
SHROOM1-203ENST00000378679 ZFP1Q6P2D0 407 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms