RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 BRSK1Q8TDC3 778 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 COA7Q96BR5 231 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 NPLQ9BXD5 320 aaPredicted RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 SLC7A8Q9UHI5 535 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ANGPTL7O43827 346 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 RYKP34925 604 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 G2E3Q7L622 706 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 CLNKQ7Z7G1 428 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 OR10H5Q8NGA6 315 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 SEMA4DQ92854 862 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 TM9SF2Q99805 663 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ACBD6Q9BR61 282 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 THAP2Q9H0W7 228 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ELAC1Q9H777 363 aaKnown RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 DDX43Q9NXZ2 648 aaKnown RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 UNC13AQ9UPW8 1703 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 FRMPD4Q14CM0 1322 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 CREBL2O60519 120 aaPredicted RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 PTTG1O95997 202 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 EPORP19235 508 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 CD9P21926 228 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 GRIA4P48058 902 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 USP45Q70EL2 814 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ADGRG6Q86SQ4 1221 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 YAF2Q8IY57 180 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 SMG8Q8ND04 991 aaKnown RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 KCNN1Q92952 543 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 TMEM159Q96B96 161 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 TAS2R10Q9NYW0 307 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 RNF212BA8MTL3 300 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ZBTB14O43829 449 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 SOX30O94993 753 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 OR56A5P0C7T3 313 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ODC1P11926 461 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 DNASE1P24855 282 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 AQP4P55087 323 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ERVK-25P63136 954 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 CACUL1Q86Y37 369 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 DENND1CQ8IV53 801 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 RPLP0P6Q8NHW5 317 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 OR52E6Q96RD3 313 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ERVK-6Q9BXR3 956 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 TMEM185BQ9H7F4 350 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 TFCP2L1Q9NZI6 479 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ERVK-18Q9QC07 812 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 MT-CO2P00403 227 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 MYCLP1P12525 358 aaPredicted RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 ITGA4P13612 1032 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 BUD31P41223 144 aaPredicted RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 MPP1Q00013 466 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 GK2Q14410 553 aaPredicted RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 UBE2J2Q8N2K1 259 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ZDHHC12Q96GR4 267 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 CPNE5Q9HCH3 593 aa8.68□□□□□ -1.02
LIG3-202ENST00000378526 ZNF230Q9UIE0 474 aaPredicted RBP8.68□□□□□ -1.02
LIG3-202ENST00000378526 CDK2P24941 298 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ADRA1DP25100 572 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 PNPLA4P41247 253 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MMP13P45452 471 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CYCSP99999 105 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 MXD1Q05195 221 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 FMR1Q06787 632 aaKnown RBP eCLIP8.67□□□□□ -1.025e-6■■■■□ 22.9
LIG3-202ENST00000378526 Q3C1V9 767 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 C4orf17Q53FE4 359 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MIIPQ5JXC2 388 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 IRAK1BP1Q5VVH5 260 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ZNF366Q8N895 744 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ETNPPLQ8TBG4 499 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 FCAMRQ8WWV6 532 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ALPK1Q96QP1 1244 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 PANX1Q96RD7 426 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CCDC32Q9BV29 185 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ITPAQ9BY32 194 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 OSBPL7Q9BZF2 842 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 DNAJC28Q9NX36 388 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MRTO4Q9UKD2 239 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 CYP8B1Q9UNU6 501 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 IGSF9BQ9UPX0 1349 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 DUOX2Q9NRD8 1548 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ISM1B1AKI9 464 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 E2F3O00716 465 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 BEST1O76090 585 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MTA2O94776 668 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 RPL21P46778 160 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 IQCCQ4KMZ1 466 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 USP49Q70CQ1 688 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ZC3HC1Q86WB0 502 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 GPR65Q8IYL9 337 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 OR2T12Q8NG77 320 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 PEX13Q92968 403 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 TNFRSF25Q93038 417 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MYRFLQ96LU7 910 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 DHX33Q9H6R0 707 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 EBF2Q9HAK2 575 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 RPS10P5Q9NQ39 176 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 TLR8Q9NR97 1041 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 RAB36O95755 333 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 IFNA5P01569 189 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MAPK9P45984 424 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms