RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 RHOJQ9H4E5 214 aa21.04■□□□□ 0.96
CBWD3-202ENST00000377342 CTNNAL1Q9UBT7 734 aa21.04■□□□□ 0.96
CBWD3-202ENST00000377342 PILRBQ9UKJ0 227 aa21.04■□□□□ 0.96
CBWD3-202ENST00000377342 LAMA1P25391 3075 aa21.04■□□□□ 0.96
CBWD3-202ENST00000377342 HMX2A2RU54 273 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 BCAT2O15382 392 aaPredicted RBP21.03■□□□□ 0.96
CBWD3-202ENST00000377342 FUCA1P04066 466 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 CEACAM5P06731 702 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 ZNF7P17097 686 aaPredicted RBP21.03■□□□□ 0.96
CBWD3-202ENST00000377342 ZNF8P17098 575 aaPredicted RBP21.03■□□□□ 0.96
CBWD3-202ENST00000377342 RPS3P23396 243 aaKnown RBP eCLIP21.03■□□□□ 0.96
CBWD3-202ENST00000377342 LIMK2P53671 638 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 EIF3BP55884 814 aaKnown RBP21.03■□□□□ 0.96
CBWD3-202ENST00000377342 ZNF844Q08AG5 666 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 DET1Q7L5Y6 550 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 TTC1Q99614 292 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 ZNF446Q9NWS9 450 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 VPS9D1Q9Y2B5 631 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 MED16Q9Y2X0 877 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 FRYLO94915 3013 aa21.03■□□□□ 0.96
CBWD3-202ENST00000377342 VEGFDO43915 354 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 INHBAP08476 426 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 ATP1B2P14415 290 aaPredicted RBP21.02■□□□□ 0.96
CBWD3-202ENST00000377342 MSH3P20585 1137 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 PPARGP37231 505 aaPredicted RBP21.02■□□□□ 0.96
CBWD3-202ENST00000377342 SLCO1A2P46721 670 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 LPAL2Q16609 132 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 MACC1Q6ZN28 852 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 IQCHQ86VS3 1027 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 FAM174AQ8TBP5 190 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 LKAAEAR1Q8TD35 194 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 HEXDCQ8WVB3 486 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 SGF29Q96ES7 293 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 PDXPQ96GD0 296 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 WDR92Q96MX6 357 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 NDNQ99608 321 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 ZCCHC2Q9C0B9 1178 aaKnown RBP21.02■□□□□ 0.96
CBWD3-202ENST00000377342 CLPBQ9H078 707 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 TXNDC16Q9P2K2 825 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 SLC24A2Q9UI40 661 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 ZNF180Q9UJW8 692 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 PCDH15Q96QU1 1955 aa21.02■□□□□ 0.96
CBWD3-202ENST00000377342 OR2AG2A6NM03 316 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 CFAP99D6REC4 459 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 DLL1O00548 723 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 CHUKO15111 745 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 PFDN6O15212 129 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 DNAJC6O75061 913 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 ASMTLO95671 621 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 FMO4P31512 558 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 MSH2P43246 934 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 THOP1P52888 689 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 GRTP1Q5TC63 336 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 ADGRD1Q6QNK2 874 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 SPATS2Q86XZ4 545 aaKnown RBP21.02■□□□□ 0.95
CBWD3-202ENST00000377342 ZNF547Q8IVP9 402 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 KLHDC7BQ96G42 594 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 DCUN1D1Q96GG9 259 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 CCDC77Q9BR77 488 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 CAAP1Q9H8G2 361 aa21.02■□□□□ 0.95
CBWD3-202ENST00000377342 MRPL40Q9NQ50 206 aaKnown RBP21.02■□□□□ 0.95
CBWD3-202ENST00000377342 SPTY2D1-AS1A0A0U1RR47 76 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 SMIM23A6NLE4 172 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 CDK14O94921 469 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 ESR1P03372 595 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 IVLP07476 585 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 RALBP11234 206 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 PRLHRP49683 370 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 AFF3P51826 1226 aaKnown RBP21.01■□□□□ 0.95
CBWD3-202ENST00000377342 IFFO1Q0D2I5 559 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 OVGP1Q12889 678 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 BMPR2Q13873 1038 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 FZD2Q14332 565 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 ZC3H14Q6PJT7 736 aaKnown RBP21.01■□□□□ 0.95
CBWD3-202ENST00000377342 TDRPQ86YL5 185 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 SPNS2Q8IVW8 549 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 BEND7Q8N7W2 519 aaPredicted RBP21.01■□□□□ 0.95
CBWD3-202ENST00000377342 OR56A4Q8NGH8 313 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 OR1E3Q8WZA6 343 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 ZBTB9Q96C00 473 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 SCARF2Q96GP6 870 aaPredicted RBP21.01■□□□□ 0.95
CBWD3-202ENST00000377342 GPR22Q99680 433 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 AARSD1Q9BTE6 412 aaKnown RBP21.01■□□□□ 0.95
CBWD3-202ENST00000377342 TMEM109Q9BVC6 243 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 PSMC3IPQ9P2W1 217 aaPredicted RBP21.01■□□□□ 0.95
CBWD3-202ENST00000377342 MTO1Q9Y2Z2 717 aaKnown RBP21.01■□□□□ 0.95
CBWD3-202ENST00000377342 PCDHB1Q9Y5F3 818 aa21.01■□□□□ 0.95
CBWD3-202ENST00000377342 PRSS38A1L453 326 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 DYNC1I1O14576 645 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 VILLO15195 856 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 NUAK1O60285 661 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 NIPSNAP2O75323 286 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 ITGA2BP08514 1039 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 PKMP14618 531 aaKnown RBP21■□□□□ 0.95
CBWD3-202ENST00000377342 CSNK1EP49674 416 aaKnown RBP21■□□□□ 0.95
CBWD3-202ENST00000377342 TIAL1Q01085 375 aaKnown RBP eCLIP21■□□□□ 0.95
CBWD3-202ENST00000377342 ALG11Q2TAA5 492 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 BCL7AQ4VC05 210 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 LRIG3Q6UXM1 1119 aa21■□□□□ 0.95
CBWD3-202ENST00000377342 SYT12Q8IV01 421 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms