RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TBC1D25Q3MII6 688 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 ZNF648Q5T619 568 aaPredicted RBP21.8■■□□□ 1.08
SRM-201ENST00000376957 DRICH1Q6PGQ1 229 aaPredicted RBP21.8■■□□□ 1.08
SRM-201ENST00000376957 FOXR1Q6PIV2 292 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 PPP1R21Q6ZMI0 780 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 TRIM48Q8IWZ4 208 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 NAP1L3Q99457 506 aaPredicted RBP21.8■■□□□ 1.08
SRM-201ENST00000376957 CMKLR1Q99788 373 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 TLR10Q9BXR5 811 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 UGT1A7Q9HAW7 530 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 UGT1A10Q9HAW8 530 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 UGT1A8Q9HAW9 530 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 SARS2Q9NP81 518 aaKnown RBP21.8■■□□□ 1.08
SRM-201ENST00000376957 TBC1D29Q9UFV1 150 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 RAXQ9Y2V3 346 aa21.8■■□□□ 1.08
SRM-201ENST00000376957 TRBV23OR9-2A0A075B6M9 112 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 PDZK1P1A8MUH7 402 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 TAF4O00268 1085 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 DXOO77932 396 aaKnown RBP21.79■■□□□ 1.08
SRM-201ENST00000376957 HALP42357 657 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 OR1D5P58170 312 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 CDH17Q12864 832 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 NFATC2Q13469 925 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 SEPT6Q14141 434 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 SKIDA1Q1XH10 827 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 GPRC6AQ5T6X5 926 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 DENND5AQ6IQ26 1287 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 RAB11FIP2Q7L804 512 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 AMZ2Q86W34 360 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 SFTPA2Q8IWL1 248 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 SLC37A2Q8TED4 501 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 PATE1Q8WXA2 126 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 PBKQ96KB5 322 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 EPB41L1Q9H4G0 881 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 RAB6BQ9NRW1 208 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 DNAJC16Q9Y2G8 782 aa21.79■■□□□ 1.08
SRM-201ENST00000376957 AP3B1O00203 1094 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 PPM1DO15297 605 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 DUX1O43812 170 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 JMJD7P0C870 316 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 PCBP4P57723 403 aaKnown RBP21.78■■□□□ 1.08
SRM-201ENST00000376957 OLIG2Q13516 323 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 PLA2G4EQ3MJ16 856 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 GPR33Q49SQ1 333 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 PHF19Q5T6S3 580 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 IGF2-ASQ6U949 168 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 SNX20Q7Z614 316 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 FBXO39Q8N4B4 442 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 TAB3Q8N5C8 712 aaPredicted RBP21.78■■□□□ 1.08
SRM-201ENST00000376957 STYXQ8WUJ0 223 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 CCDC97Q96F63 343 aaPredicted RBP21.78■■□□□ 1.08
SRM-201ENST00000376957 DCBLD2Q96PD2 775 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 FOXP3Q9BZS1 431 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 ETNK1Q9HBU6 452 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 FKBPLQ9UIM3 349 aa21.78■■□□□ 1.08
SRM-201ENST00000376957 ATXN7L1Q9ULK2 861 aaPredicted RBP21.78■■□□□ 1.08
SRM-201ENST00000376957 PLD2O14939 933 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 B4GAT1O43505 415 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 KIF5CO60282 957 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 VIPP01282 170 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 EPHA4P54764 986 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 TMPRSS15P98073 1019 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 SQSTM1Q13501 440 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 POU6F1Q14863 301 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 TMEM220Q6QAJ8 160 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 BEND7Q8N7W2 519 aaPredicted RBP21.77■■□□□ 1.08
SRM-201ENST00000376957 ZNF248Q8NDW4 579 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 SNIP1Q8TAD8 396 aaKnown RBP21.77■■□□□ 1.08
SRM-201ENST00000376957 SLC46A1Q96NT5 459 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 TTC1Q99614 292 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 CPNE7Q9UBL6 633 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 FRYQ5TBA9 3013 aa21.77■■□□□ 1.08
SRM-201ENST00000376957 LDB2O43679 373 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 APRTP07741 180 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 TPH1P17752 444 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 CXCR5P32302 372 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 ZNF140P52738 457 aaPredicted RBP21.76■■□□□ 1.07
SRM-201ENST00000376957 ZFP36L1Q07352 338 aaKnown RBP21.76■■□□□ 1.07
SRM-201ENST00000376957 TRA2AQ13595 282 aaKnown RBP eCLIP21.76■■□□□ 1.07
SRM-201ENST00000376957 PTPRCAPQ14761 206 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 WASH2PQ6VEQ5 465 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 USP53Q70EK8 1073 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 NLRP9Q7RTR0 991 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 RBM12BQ8IXT5 1001 aaKnown RBP21.76■■□□□ 1.07
SRM-201ENST00000376957 RASGEF1AQ8N9B8 481 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 OR4D9Q8NGE8 314 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 OR13C4Q8NGS5 318 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 CXorf40BQ96DE9 158 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 COPS8Q99627 209 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 VPS37BQ9H9H4 285 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 RDH14Q9HBH5 336 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 WASH6PQ9NQA3 447 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 PRDM8Q9NQV8 689 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 NLE1Q9NVX2 485 aaPredicted RBP21.76■■□□□ 1.07
SRM-201ENST00000376957 TMPRSS11EQ9UL52 423 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 PCYT1BQ9Y5K3 369 aaPredicted RBP21.76■■□□□ 1.07
SRM-201ENST00000376957 UNC13CQ8NB66 2214 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 EPG5Q9HCE0 2579 aa21.76■■□□□ 1.07
SRM-201ENST00000376957 A0A087WV48 116 aa21.75■■□□□ 1.07
SRM-201ENST00000376957 IGHV1OR21-1A0A087WYE8 117 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms