RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 TRMT6Q9UJA5 497 aaKnown RBP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 PKP3Q9Y446 797 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 A6NL46 340 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 HK2P52789 917 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TAF12Q16514 161 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 SYT16Q17RD7 645 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FBXL22Q6P050 247 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FAM117BQ6P1L5 589 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 CRTC3Q6UUV7 619 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FAM151BQ6UXP7 276 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 SLC22A9Q8IVM8 553 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 KIAA2013Q8IYS2 634 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ADGRG5Q8IZF4 528 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 GPC2Q8N158 579 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 SMYD1Q8NB12 490 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 LHPPQ9H008 270 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TOR3AQ9H497 397 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 NOL6Q9H6R4 1146 aaKnown RBP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 CCSER2Q9H7U1 834 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 MEAF6Q9HAF1 191 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FLRT1Q9NZU1 646 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TMEM181Q9P2C4 612 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 NUMA1Q14980 2115 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 LOC100506127A0A0U1RQW1 187 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 RRN3P2A6NIE6 340 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FUCA1P04066 466 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 CCNCP24863 283 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 DAB2P98082 770 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TNK2Q07912 1038 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ARHGEF7Q14155 803 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ACAP2Q15057 778 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FAM174BQ3ZCQ3 159 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ZBED5Q49AG3 693 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 RANBP10Q6VN20 620 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 AGMOQ6ZNB7 445 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ZDHHC13Q8IUH4 622 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 PELI3Q8N2H9 469 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 UBE2FQ969M7 185 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 MRPL40Q9NQ50 206 aaKnown RBP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 GDAP2Q9NXN4 497 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 SPO11Q9Y5K1 396 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FER1L6Q2WGJ9 1857 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 DOCK3Q8IZD9 2030 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 CAPGP40121 348 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 RGRP47804 291 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 RAD51Q06609 339 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 SMN1Q16637 294 aaKnown RBP11.68□□□□□ -0.54
MCF2L-202ENST00000375597 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 KIAA0930Q6ICG6 404 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-202ENST00000375597 ELMSAN1Q6PJG2 1045 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 ADCK1Q86TW2 530 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 ZNF280BQ86YH2 543 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 GPSM1Q86YR5 675 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 PIANPQ8IYJ0 282 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 SLC7A5P1Q8MH63 180 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 THEM5Q8N1Q8 247 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 Q8N9G6 341 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-202ENST00000375597 OR2T11Q8NH01 316 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 SEPT8Q92599 483 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 NFKBIZQ9BYH8 718 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 ADARB2Q9NS39 739 aaKnown RBP11.68□□□□□ -0.54
MCF2L-202ENST00000375597 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 ADGRE2Q9UHX3 823 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 BAG5Q9UL15 447 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 MYO9BQ13459 2157 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 MYO10Q9HD67 2058 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 M0R129 80 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 ZSCAN9O15535 394 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-202ENST00000375597 SEC22BO75396 215 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 TOMM70O94826 608 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 ALPIP09923 528 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 CD1DP15813 335 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 POM121L1PQ3SYA9 428 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 PSAPL1Q6NUJ1 521 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 PGBD5Q8N414 524 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 TPD52L3Q96J77 140 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 FEM1CQ96JP0 617 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 SMAD5Q99717 465 aaKnown RBP11.68□□□□□ -0.54
MCF2L-202ENST00000375597 C6orf62Q9GZU0 229 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-202ENST00000375597 MARCH2Q9P0N8 246 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 SH3GLB1Q9Y371 365 aa11.68□□□□□ -0.54
MCF2L-202ENST00000375597 TCRBV3S1A0A5B6 114 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 FXYD1O00168 92 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 STX7O15400 261 aaKnown RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PRKD3O94806 890 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PIGAP37287 484 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TAF10Q12962 218 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SEMA3BQ13214 749 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 ZNF792Q3KQV3 632 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TMTC4Q5T4D3 741 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 ATXN7L2Q5T6C5 722 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PTRHD1Q6GMV3 140 aaKnown RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PPP4R4Q6NUP7 873 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PLEKHH3Q7Z736 793 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SLCO6A1Q86UG4 719 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 DENND1CQ8IV53 801 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TRPV3Q8NET8 790 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms