RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 HES1Q14469 280 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MFSD13AQ14CX5 517 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PDK1Q15118 436 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 KCTD19Q17RG1 926 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PAN3Q58A45 887 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ADGRD1Q6QNK2 874 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 RIPOR1Q6ZS17 1223 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 KIF18BQ86Y91 864 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 LGMNQ99538 433 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 LRRC1Q9BTT6 524 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 YTHDF1Q9BYJ9 559 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ANKRD60Q9BZ19 345 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MORF4L1Q9UBU8 362 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SARDHQ9UL12 918 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ICKQ9UPZ9 632 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ACTL7BQ9Y614 415 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MED23Q9ULK4 1368 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SNAPC4Q5SXM2 1469 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ARHGEF17Q96PE2 2063 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 A6NL46 340 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ANXA9O76027 345 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ETV5P41161 510 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ARCN1P48444 511 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 APLP1P51693 650 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 EPHA5P54756 1037 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SPIBQ01892 262 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SEMA3BQ13214 749 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SNTA1Q13424 505 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MOGSQ13724 837 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 RAET1LQ5VY80 246 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PLPP4Q5VZY2 271 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 LYSMD4Q5XG99 296 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ATG9BQ674R7 924 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 OR52W1Q6IF63 320 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 TRNP1Q6NT89 227 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PRMT9Q6P2P2 845 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 VHLLQ6RSH7 139 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GPAT4Q86UL3 456 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SLC51BQ86UW2 128 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SNX32Q86XE0 403 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MRPL41Q8IXM3 137 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ELMOD2Q8IZ81 293 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 KRT35Q92764 455 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 C3orf49Q96BT1 292 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MMABQ96EY8 250 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GIMAP5Q96F15 307 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PAGE5Q96GU1 130 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 AGXT2Q9BYV1 514 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PABPC3Q9H361 631 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ATP13A3Q9H7F0 1226 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 RRAGCQ9HB90 399 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SERINC1Q9NRX5 453 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 UCKL1Q9NWZ5 548 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 SLAIN2Q9P270 581 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PLEKHM1Q9Y4G2 1056 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MAPKBP1O60336 1514 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 AOX1Q06278 1338 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 TRAV19A0A0A6YYK7 116 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 LGALS8O00214 317 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PIP5K1BO14986 540 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 ITGB1P05556 798 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PRLRP16471 622 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 AFF3P51826 1226 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PPP2R2AP63151 447 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 HYAL2Q12891 473 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 RNF151Q2KHN1 245 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 FAM171A1Q5VUB5 890 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 CRTC3Q6UUV7 619 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 CHST15Q7LFX5 561 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 NLRC3Q7RTR2 1065 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 METTL4Q8N3J2 472 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 WDSUB1Q8N9V3 476 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 FCAMRQ8WWV6 532 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 CPA5Q8WXQ8 436 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 FBXL8Q96CD0 374 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 CPXM1Q96SM3 734 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 TLE6Q9H808 572 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 TM9SF3Q9HD45 589 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 DUSP22Q9NRW4 184 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 FTSJ1Q9UET6 329 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GJD2Q9UKL4 321 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 REXO2Q9Y3B8 237 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PCDHGA7Q9Y5G6 932 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 TNKSO95271 1327 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MAGEB16A2A368 324 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 FAM86C2PA6NEL3 165 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 LDB2O43679 373 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PRICKLE3O43900 615 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 RNASEH2AO75792 299 aaKnown RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 OR2J3O76001 311 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 PLATP00750 562 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GH1P01241 217 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 FAHP16930 419 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GPD1P21695 349 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 MSX2P35548 267 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GMPSP49915 693 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-202ENST00000375405 CTSWP56202 376 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 USP46P62068 366 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 HSF1Q00613 529 aa4.61□□□□□ -1.67
SCN1A-202ENST00000375405 GRK1Q15835 563 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms