RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PSMA4P25789 261 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 SCNN1BP51168 640 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ADARP55265 1226 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 DUSP4Q13115 394 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 GRB7Q14451 532 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 TSNQ15631 228 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PTPRNQ16849 979 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 XKR7Q5GH72 579 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 MTX3Q5HYI7 312 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 SPOUT1Q5T280 376 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 INTS11Q5TA45 600 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 AP1ARQ63HQ0 302 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PRR23BQ6ZRT6 265 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 SLC15A3Q8IY34 581 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 CFAP52Q8N1V2 620 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PNPLA1Q8N8W4 532 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 LPCAT1Q8NF37 534 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 GIPC2Q8TF65 315 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 KCNJ9Q92806 393 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 FUBP1Q96AE4 644 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PPWD1Q96BP3 646 aaKnown RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 LRRC58Q96CX6 371 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 CRISPLD1Q9H336 500 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 TUBB1Q9H4B7 451 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PNPLA3Q9NST1 481 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 NUDT4Q9NZJ9 180 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 ZIM2Q9NZV7 527 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 LEF1Q9UJU2 399 aaPredicted RBP13.82□□□□□ -0.2
HMGCL-203ENST00000374490 PCTPQ9UKL6 214 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 RAI2Q9Y5P3 530 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 GPR45Q9Y5Y3 372 aa13.82□□□□□ -0.2
HMGCL-203ENST00000374490 VCANP13611 3396 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 NPEPPSL1A6NEC2 478 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 BTN3A1O00481 513 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 NME4O00746 187 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 STX7O15400 261 aaKnown RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 PGM3O95394 542 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 ESR1P03372 595 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 CYBBP04839 570 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 LINC00032P0C843 101 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 ATP6V1B2P21281 511 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 GRIA3P42263 894 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 PTGER3P43115 390 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 FOXA1P55317 472 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 EEFSECP57772 596 aaKnown RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 IL2P60568 153 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 CYTH1Q15438 398 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 CCDC85BQ15834 202 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 SLC5A9Q2M3M2 681 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 VPS26BQ4G0F5 336 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 AASDHQ4L235 1098 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 SETMARQ53H47 684 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 PPP2R2DQ66LE6 453 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 CYP2R1Q6VVX0 501 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 B3GNT6Q6ZMB0 384 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 ZBTB49Q6ZSB9 765 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 GPRIN3Q6ZVF9 776 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 CARM1Q86X55 608 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 GPSM1Q86YR5 675 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 CAMK1DQ8IU85 385 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 MFSD2AQ8NA29 543 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 NSUN5Q96P11 429 aaKnown RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 ZNF382Q96SR6 550 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 PRPF18Q99633 342 aaKnown RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 BRINP2Q9C0B6 783 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 SEMA6AQ9H2E6 1030 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 APPL1Q9UKG1 709 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 FAM50BQ9Y247 325 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 YBX2Q9Y2T7 364 aaKnown RBP13.81□□□□□ -0.2
HMGCL-203ENST00000374490 MED16Q9Y2X0 877 aa13.81□□□□□ -0.2
HMGCL-203ENST00000374490 DHRS12A0PJE2 317 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 LRRC14BA6NHZ5 514 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 FXYD1O00168 92 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 IFRD1O00458 451 aaPredicted RBP13.8□□□□□ -0.2
HMGCL-203ENST00000374490 AKAP10O43572 662 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 EEDO75530 441 aaKnown RBP13.8□□□□□ -0.2
HMGCL-203ENST00000374490 LATS1O95835 1130 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 PRLP01236 227 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 UMPSP11172 480 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 ATF6P18850 670 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 MC4RP32245 332 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 RGRP47804 291 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 ERVK-8P63133 956 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 NFYCQ13952 458 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 RCAN2Q14206 197 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 RBBP7Q16576 425 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 RTP2Q5QGT7 225 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 TBCELQ5QJ74 424 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 KRT80Q6KB66 452 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 HMBOX1Q6NT76 420 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
HMGCL-203ENST00000374490 HM13Q8TCT9 377 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 ZNF512Q96ME7 567 aaPredicted RBP13.8□□□□□ -0.2
HMGCL-203ENST00000374490 BIRC8Q96P09 236 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 C19orf43Q9BQ61 176 aa13.8□□□□□ -0.2
HMGCL-203ENST00000374490 HGH1Q9BTY7 390 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms