RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 APOL5Q9BWW9 433 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 IL26Q9NPH9 171 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 DNMT3BQ9UBC3 853 aaKnown RBP15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 CROTQ9UKG9 612 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 DTNAQ9Y4J8 743 aa15.82■□□□□ 0.12
CNKSR1-202ENST00000374253 OBSL1O75147 1896 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 TRIM43BA6NCK2 446 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 ZBBXA8MT70 800 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 GFRA2O00451 464 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 PRMT5O14744 637 aaPredicted RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 PFDN6O15212 129 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 ZNF821O75541 412 aaPredicted RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 PARNO95453 639 aaKnown RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 OLFM2O95897 454 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 LRG1P02750 347 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 C8AP07357 584 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 CASP2P42575 452 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 ZNF783Q6ZMS7 281 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 FRA10AC1Q70Z53 315 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 RIN3Q8TB24 985 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 TRIM43Q96BQ3 446 aaPredicted RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 P2RY12Q9H244 342 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 SPAG4Q9NPE6 437 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 ABCB8Q9NUT2 735 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 SCOCQ9UIL1 159 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 SLC4A7Q9Y6M7 1214 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 LIN7AO14910 233 aaPredicted RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 RNASEH2AO75792 299 aaKnown RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 ESR1P03372 595 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 LYNP07948 512 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 LBPP18428 481 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 CCR2P41597 374 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 PABPC1LQ4VXU2 614 aaKnown RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 FBXL19Q6PCT2 694 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 MIER2Q8N344 545 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 PAWRQ96IZ0 340 aaKnown RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 SLC46A2Q9BY10 475 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 YIPF3Q9GZM5 350 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 CLPBQ9H078 707 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 NOL11Q9H8H0 719 aaKnown RBP15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 MAGEE1Q9HCI5 957 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 HACD3Q9P035 362 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 MAP10Q9P2G4 905 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 VPS9D1Q9Y2B5 631 aa15.81■□□□□ 0.12
CNKSR1-202ENST00000374253 E2F3O00716 465 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 TRBC1P01850 177 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 BPIP17213 487 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 PSMA3P25788 255 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 GDF5P43026 501 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 PIK3CGP48736 1102 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 TRIM25Q14258 630 aaKnown RBP15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 CHRNA6Q15825 494 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 PLEKHG6Q3KR16 790 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 AARS2Q5JTZ9 985 aaKnown RBP15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 TMC8Q8IU68 726 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 PPP2R3CQ969Q6 453 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 DCUN1D1Q96GG9 259 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 ASB2Q96Q27 587 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 NSUN3Q9H649 340 aaKnown RBP15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 RIMS3Q9UJD0 308 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 PCDHGB4Q9UN71 923 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 PCDHGB5Q9Y5G0 923 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 XIRP2A4UGR9 3374 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 CHD9Q3L8U1 2897 aa15.8■□□□□ 0.12
CNKSR1-202ENST00000374253 ABHD14A-ACY1A0A1B0GW23 586 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 NPIPB15A6NHN6 443 aaPredicted RBP15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 H7C0S8 307 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 LEFTY2O00292 366 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 TRIM24O15164 1050 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 BAIAP3O94812 1187 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 SLC25A14O95258 325 aaPredicted RBP15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 HTR6P50406 440 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ERVPABLB-1P60509 514 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 AP1S1P61966 158 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 NFATC2Q13469 925 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 OGFRL1Q5TC84 451 aaPredicted RBP15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 LETMD1Q6P1Q0 360 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ZNF483Q8TF39 744 aaPredicted RBP15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ASB9Q96DX5 294 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 TCEAL4Q96EI5 215 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 EGFL7Q9UHF1 273 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 MAGEA13PA6NCF6 341 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 CXCL14O95715 111 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ESRRBO95718 433 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 VCLP18206 1134 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 HLA-FP30511 346 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 CLCN4P51793 760 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ADGRE1Q14246 886 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 AAK1Q2M2I8 961 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 MBOAT1Q6ZNC8 495 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ADGRG2Q8IZP9 1017 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ICA1LQ8NDH6 482 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 ZMYM5Q9UJ78 669 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 CRLS1Q9UJA2 301 aa15.79■□□□□ 0.12
CNKSR1-202ENST00000374253 GIPC1O14908 333 aa15.78■□□□□ 0.12
CNKSR1-202ENST00000374253 CASQ2O14958 399 aaPredicted RBP15.78■□□□□ 0.12
CNKSR1-202ENST00000374253 ANGPT2O15123 496 aa15.78■□□□□ 0.12
CNKSR1-202ENST00000374253 LILRB3O75022 631 aa15.78■□□□□ 0.12
CNKSR1-202ENST00000374253 RFPL2O75678 378 aa15.78■□□□□ 0.12
CNKSR1-202ENST00000374253 UQCRBP14927 111 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms