RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 BST1Q10588 318 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 PHF13Q86YI8 300 aaPredicted RBP14.22□□□□□ -0.13
TRAF1-201ENST00000373887 C1orf127Q8N9H9 656 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 BTN2A3PQ96KV6 586 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 PNPOQ9NVS9 261 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 GGA2Q9UJY4 613 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 SLC27A6Q9Y2P4 619 aa14.22□□□□□ -0.13
TRAF1-201ENST00000373887 AFDNP55196 1824 aaKnown RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 A0A1W2PQ72 361 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 A0A1W2PRU2 124 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 CPSF4LA6NMK7 179 aaKnown RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 KCNA5P22460 613 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 MTHFRP42898 656 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 GALK1P51570 392 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF135P52742 658 aaPredicted RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 CASP9P55211 416 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 HTRA3P83110 453 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 C2orf27AQ580R0 203 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 SPDYCQ5MJ68 293 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 NOL11Q9H8H0 719 aaKnown RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 RAPGEFL1Q9UHV5 662 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF221Q9UK13 617 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 TELO2Q9Y4R8 837 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 RPL5P46777 297 aaKnown RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 LSM12Q3MHD2 195 aaKnown RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 RNF43Q68DV7 783 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 CADM2Q8N3J6 435 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 OR2L3Q8NG85 312 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 NPLOC4Q8TAT6 608 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 MRPL57Q9BQC6 102 aaKnown RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 EXD2Q9NVH0 621 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 FAM240BA0A1B0GVZ2 78 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 ENPP3O14638 875 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 APOC1P02654 83 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 RPL3P39023 403 aaKnown RBP14.21□□□□□ -0.13
TRAF1-201ENST00000373887 PHF12Q96QT6 1004 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 SGK2Q9HBY8 427 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 SIRPGQ9P1W8 387 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 XPR1Q9UBH6 696 aa14.21□□□□□ -0.13
TRAF1-201ENST00000373887 OR2AG2A6NM03 316 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 KMOO15229 486 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 ARL2P36404 184 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 DNASE1L1P49184 302 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 WNT3AP56704 352 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 PTGES3Q15185 160 aaKnown RBP14.21□□□□□ -0.14
TRAF1-201ENST00000373887 SF1Q15637 639 aaKnown RBP14.21□□□□□ -0.14
TRAF1-201ENST00000373887 TAPT1Q6NXT6 567 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 AMIGO3Q86WK7 504 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 XYLT1Q86Y38 959 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 PYROXD2Q8N2H3 581 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 DEFB119Q8N690 84 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 SHC3Q92529 594 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 KREMEN1Q96MU8 473 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 ALKBH4Q9NXW9 302 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 GTF2IRD1Q9UHL9 959 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 hCG_1818297A0A087WSY0 165 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 MYBPHLA2RUH7 354 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 SLC38A8A6NNN8 435 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 CCL22O00626 93 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 BMP6P22004 513 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 TIE1P35590 1138 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 USP4Q13107 963 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 DLG2Q15700 870 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 ANXA8L1Q5VT79 327 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 LIPMQ5VYY2 423 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 BICRALQ6AI39 1079 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 FRRS1Q6ZNA5 592 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 LDB1Q86U70 411 aaPredicted RBP14.21□□□□□ -0.14
TRAF1-201ENST00000373887 CLIP4Q8N3C7 705 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 OR7D4Q8NG98 312 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 SNX27Q96L92 541 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 WDR12Q9GZL7 423 aaKnown RBP14.21□□□□□ -0.14
TRAF1-201ENST00000373887 CST11Q9H112 138 aa14.21□□□□□ -0.14
TRAF1-201ENST00000373887 PDP1Q9P0J1 537 aaPredicted RBP14.21□□□□□ -0.14
TRAF1-201ENST00000373887 MATN4O95460 622 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 VBP1P61758 197 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 EIF2S3LQ2VIR3 472 aaKnown RBP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 PGM2Q96G03 612 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF670Q9BS34 389 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 DPEP2Q9H4A9 486 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SP140LQ9H930 580 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 TBC1D14Q9P2M4 693 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 XKRYO14609 159 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 TSPAN4O14817 238 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 AZIN1O14977 448 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SNX3O60493 162 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 NR4A1P22736 598 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SLC7A2P52569 658 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SULT2A1Q06520 285 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 GFOD2Q3B7J2 385 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 ZNF554Q86TJ5 538 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 SPPL2CQ8IUH8 684 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 OR8H1Q8NGG4 311 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 HERVK_113Q902F9 699 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 JSRP1Q96MG2 331 aaPredicted RBP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 GORASP1Q9BQQ3 440 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 NMUR1Q9HB89 426 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 AK5Q9Y6K8 562 aa14.2□□□□□ -0.14
TRAF1-201ENST00000373887 DDX3YO15523 660 aaKnown RBP14.2□□□□□ -0.14
TRAF1-201ENST00000373887 HOXB8P17481 243 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms