RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 BLOC1S5Q8TDH9 187 aa21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 ALG3Q92685 438 aa21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 BAG1Q99933 345 aaPredicted RBP21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 FERMT1Q9BQL6 677 aa21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 GORASP1Q9BQQ3 440 aa21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 OSGEPL1Q9H4B0 414 aa21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 CPNE7Q9UBL6 633 aa21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 BPTFQ12830 3046 aa21.4■■□□□ 1.02
CCDC28B-201ENST00000373602 ANXA9O76027 345 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 RBP3P10745 1247 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 CETN2P41208 172 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 EPHA4P54764 986 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 GEMP55040 296 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 EIF3EP60228 445 aaKnown RBP21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 UBE2IP63279 158 aaKnown RBP21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 TMEM115Q12893 351 aaPredicted RBP21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 PLA2G4EQ3MJ16 856 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 WDR74Q6RFH5 385 aaPredicted RBP21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 ZFAND4Q86XD8 727 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 BRSK1Q8TDC3 778 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 TAAR9Q96RI9 348 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 FSD1LQ9BXM9 530 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 PCDHGA3Q9Y5H0 932 aa21.39■■□□□ 1.01
CCDC28B-201ENST00000373602 MACROD2A1Z1Q3 448 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 EFSO43281 561 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 PPFIA2O75334 1257 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 AGTP01019 485 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 PYGMP11217 842 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 XRCC1P18887 633 aaPredicted RBP21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 CSTF2P33240 577 aaKnown RBP eCLIP21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 PPM1FP49593 454 aaPredicted RBP21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 CHRNA6Q15825 494 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 ANKRD20A2Q5SQ80 823 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 ANKRD20A1Q5TYW2 823 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 ANKRD20A3Q5VUR7 823 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 AADACL2Q6P093 401 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 KIAA1328Q86T90 577 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 DTX1Q86Y01 620 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 GDAP1Q8TB36 358 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 WBP1Q96G27 269 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 FICDQ9BVA6 458 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 ZMYND15Q9H091 742 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 SCHIP1Q9P0W5 487 aaPredicted RBP21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 DNAJC16Q9Y2G8 782 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 PKP3Q9Y446 797 aa21.38■■□□□ 1.01
CCDC28B-201ENST00000373602 GLYATL1P3A0A0U1RQE8 302 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 LILRA5A6NI73 299 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 TJP3O95049 919 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 PRB1P04280 392 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 GTF2H3Q13889 308 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 DARS2Q6PI48 645 aaKnown RBP21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 FAM151BQ6UXP7 276 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 RANBP10Q6VN20 620 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 C11orf96Q7Z7L8 435 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 CCDC112Q8NEF3 446 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 NCSTNQ92542 709 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 TTC9Q92623 222 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 FAM118BQ9BPY3 351 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 TBC1D10AQ9BXI6 508 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 EPB41L1Q9H4G0 881 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 UCK1Q9HA47 277 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 AMFRQ9UKV5 643 aa21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 AAR2Q9Y312 384 aaKnown RBP21.37■■□□□ 1.01
CCDC28B-201ENST00000373602 B4E171 279 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 GAPDHSO14556 408 aaPredicted RBP21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 KCNN4O15554 427 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 BUD23O43709 281 aaKnown RBP21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A9O60656 530 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A6P19224 532 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A1P22309 533 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A4P22310 534 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 PSMB4P28070 264 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 ADRA1AP35348 466 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A3P35503 534 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 SLC19A1P41440 591 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 TSPAN7P41732 249 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 ARSDP51689 593 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 ITGA9Q13797 1035 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 TAF1BQ53T94 588 aaPredicted RBP21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 ABRAXAS1Q6UWZ7 409 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 WASH2PQ6VEQ5 465 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 ARHGAP22Q7Z5H3 698 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 TRAPPC5Q8IUR0 188 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 DDHD1Q8NEL9 900 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 PMEPA1Q969W9 287 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 DDA1Q9BW61 102 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A7Q9HAW7 530 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A10Q9HAW8 530 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 UGT1A8Q9HAW9 530 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 WASH6PQ9NQA3 447 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 WDR70Q9NW82 654 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 OCIAD1Q9NX40 245 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 ZNF624Q9P2J8 865 aaPredicted RBP21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 IMPACTQ9P2X3 320 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 PCDHB11Q9Y5F2 797 aa21.36■■□□□ 1.01
CCDC28B-201ENST00000373602 PDZK1P1A8MUH7 402 aa21.35■■□□□ 1.01
CCDC28B-201ENST00000373602 STX7O15400 261 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms