RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 RPP40O75818 363 aaKnown RBP16.24■□□□□ 0.19
SDC4-201ENST00000372733 ALPLP05186 524 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 ENO2P09104 434 aaPredicted RBP16.24■□□□□ 0.19
SDC4-201ENST00000372733 FMO4P31512 558 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 STC1P52823 247 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 RAB15P59190 212 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 PLIN5Q00G26 463 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 EMX2Q04743 252 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 PIGFQ07326 219 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 RBBP7Q16576 425 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 IMPG1Q17R60 797 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 SETMARQ53H47 684 aaPredicted RBP16.24■□□□□ 0.19
SDC4-201ENST00000372733 EGFLAMQ63HQ2 1017 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 IGFN1Q86VF2 1251 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 STAG3L4Q8TBR4 150 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 ZNF599Q96NL3 588 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 SEMA3CQ99985 751 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 NEURL2Q9BR09 285 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 LRRC3Q9BY71 257 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 GMIPQ9P107 970 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 ASB1Q9Y576 335 aa16.24■□□□□ 0.19
SDC4-201ENST00000372733 WASH4PA8MWX3 477 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 CLPXO76031 633 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 GRIK1P39086 918 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 ITGADQ13349 1161 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 GRB14Q14449 540 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 CYP2A13Q16696 494 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 SDHAF4Q5VUM1 108 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 METTL23Q86XA0 190 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 FAM86B1Q8N7N1 296 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 FNDC5Q8NAU1 212 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 LEMD2Q8NC56 503 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 NLGN2Q8NFZ4 835 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 RAB2BQ8WUD1 216 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 TRUB1Q8WWH5 349 aaKnown RBP16.23■□□□□ 0.19
SDC4-201ENST00000372733 ISG20Q96AZ6 181 aaKnown RBP16.23■□□□□ 0.19
SDC4-201ENST00000372733 HBEGFQ99075 208 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 TOR3AQ9H497 397 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 CARS2Q9HA77 564 aaKnown RBP16.23■□□□□ 0.19
SDC4-201ENST00000372733 POPDC3Q9HBV1 291 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 PSME2Q9UL46 239 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 ST3GAL5Q9UNP4 418 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 SLC30A1Q9Y6M5 507 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 MUSKO15146 869 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 POMCP01189 267 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 CTSHP09668 335 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 CRHBPP24387 322 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 PLA2G16P53816 162 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 FXNQ16595 210 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 RGS21Q2M5E4 152 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 BTLAQ7Z6A9 289 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 PROSER1Q86XN7 944 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 OR4L1Q8NH43 312 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 PROKR1Q8TCW9 393 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 PALMDQ9NP74 551 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
SDC4-201ENST00000372733 RIC8BQ9NVN3 520 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 GALPQ9UBC7 116 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 WARS2Q9UGM6 360 aaKnown RBP16.23■□□□□ 0.19
SDC4-201ENST00000372733 PCTPQ9UKL6 214 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 ERGIC3Q9Y282 383 aa16.23■□□□□ 0.19
SDC4-201ENST00000372733 FAM234BA2RU67 622 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 TYW5A2RUC4 315 aaKnown RBP16.22■□□□□ 0.19
SDC4-201ENST00000372733 C17orf102A2RUQ5 167 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 F8W810 466 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 BTN3A1O00481 513 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 TNFRSF10BO14763 440 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 COQ9O75208 318 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 DEAF1O75398 565 aaPredicted RBP16.22■□□□□ 0.19
SDC4-201ENST00000372733 HTR1AP08908 422 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 OR4Q2P0C623 313 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 CDH3P22223 829 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 RXRGP48443 463 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 ERVK-8P63133 956 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 AQP6Q13520 282 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 SPIDRQ14159 915 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 SPCS2Q15005 226 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 CRY1Q16526 586 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 ANKRD34AQ69YU3 496 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 GTF2IRD2BQ6EKJ0 949 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 MSANTD2Q6P1R3 559 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 THAP5Q7Z6K1 395 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 GTF2IRD2Q86UP8 949 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 SCN4BQ8IWT1 228 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 ZNF683Q8IZ20 524 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 HS3ST5Q8IZT8 346 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 GPR150Q8NGU9 434 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 FUBP1Q96AE4 644 aaKnown RBP16.22■□□□□ 0.19
SDC4-201ENST00000372733 TADA1Q96BN2 335 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 SERPINB11Q96P15 392 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 HGH1Q9BTY7 390 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 DGCR6LQ9BY27 220 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 ZYG11BQ9C0D3 744 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 DERL2Q9GZP9 239 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 SMURF2Q9HAU4 748 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 EIF2B4Q9UI10 523 aaKnown RBP16.22■□□□□ 0.19
SDC4-201ENST00000372733 MAGEL2Q9UJ55 1249 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 DYTNA2CJ06 578 aa16.22■□□□□ 0.19
SDC4-201ENST00000372733 SOBPA7XYQ1 873 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms