RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 DNM1LO00429 736 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 AP3D1O14617 1153 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 NDUFS2O75306 463 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 GSTT1P30711 240 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 RFC2P35250 354 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 CCNFP41002 786 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 IDH2P48735 452 aaKnown RBP10.4□□□□□ -0.75
NUP188-201ENST00000372577 GHRHRQ02643 423 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 C16orf72Q14CZ0 275 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 CCL14Q16627 93 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 MED27Q6P2C8 311 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 MZT2AQ6P582 158 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 SEC14L1Q92503 715 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 DCUN1D5Q9BTE7 237 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 EXD2Q9NVH0 621 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 SRRDQ9UH36 339 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.75
NUP188-201ENST00000372577 ATP6V1HQ9UI12 483 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 AK5Q9Y6K8 562 aa10.4□□□□□ -0.75
NUP188-201ENST00000372577 CCL16O15467 120 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 PAPSS2O95340 614 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 HLA-DQB2P05538 268 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 HERVK_113P63132 956 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 IL23RQ5VWK5 629 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 DENND6AQ8IWF6 608 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 BPIFB6Q8NFQ5 453 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 S100ZQ8WXG8 99 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 ERVK-6Q9BXR3 956 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 C6orf62Q9GZU0 229 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 DENND2DQ9H6A0 471 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 ISM1B1AKI9 464 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 IDSP22304 550 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 PTX3P26022 381 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 SPIBQ01892 262 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 GPAT3Q53EU6 434 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 TXNRD3NBQ6F5E7 133 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 NEK5Q6P3R8 708 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 PIK3C3Q8NEB9 887 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 LPGAT1Q92604 370 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 CADM1Q9BY67 442 aaKnown RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 EGFL7Q9UHF1 273 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 PACSIN3Q9UKS6 424 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 OLR1P78380 273 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 PRR23BQ6ZRT6 265 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 GJD3Q8N144 294 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 SVOPLQ8N434 492 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 ARL14EPQ8N8R7 260 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 ZNF540Q8NDQ6 660 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 RASSF5Q8WWW0 418 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 APOLD1Q96LR9 279 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 FNDC11Q9BVV2 318 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 STRA6Q9BX79 667 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 XYLT2Q9H1B5 865 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 POLR1BQ9H9Y6 1135 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 ERGIC3Q9Y282 383 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 TULP2O00295 520 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 SNAI1O95863 264 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 PRKAG1P54619 331 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 USP46P62068 366 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 SRSF11Q05519 484 aaKnown RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 CNKSR3Q6P9H4 555 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 TRAF7Q6Q0C0 670 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 LINGO4Q6UY18 593 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 CENPNQ96H22 339 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 DDX18Q9NVP1 670 aaKnown RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
NUP188-201ENST00000372577 COLEC10Q9Y6Z7 277 aa10.39□□□□□ -0.75
NUP188-201ENST00000372577 ABHD14A-ACY1A0A1B0GW23 586 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 HSD17B2P37059 387 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 RPS6KA3P51812 740 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 MANFP55145 182 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 LIPEQ05469 1076 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 GPR17Q13304 367 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CEP78Q5JTW2 689 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 AGMOQ6ZNB7 445 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 OSTM1Q86WC4 334 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CACUL1Q86Y37 369 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 KREMEN2Q8NCW0 462 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 DGCR14Q96DF8 476 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 CLPTM1LQ96KA5 538 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 C1orf74Q96LT6 269 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 DGCR6LQ9BY27 220 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 ALG2Q9H553 416 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CCDC177Q9NQR7 707 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 DUS2Q9NX74 493 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 PLK2Q9NYY3 685 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 GULP1Q9UBP9 304 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 NDOR1Q9UHB4 597 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 STBD1O95210 358 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 C8AP07357 584 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 TCF4P15884 667 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 CLK3P49761 638 aaKnown RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 CLDN10P78369 228 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 KLF1Q13351 362 aaPredicted RBP10.38□□□□□ -0.75
NUP188-201ENST00000372577 POM121L1PQ3SYA9 428 aa10.38□□□□□ -0.75
NUP188-201ENST00000372577 FBXL22Q6P050 247 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms