RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SLC39A5Q6ZMH5 540 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 LCA5Q86VQ0 697 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 MYO1HQ8N1T3 1032 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PELI3Q8N2H9 469 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 FIBCD1Q8N539 461 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CPSF7Q8N684 471 aaKnown RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 ARL10Q8N8L6 244 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CDC26Q8NHZ8 85 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CD200R1Q8TD46 325 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 KIAA1191Q96A73 305 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PLD4Q96BZ4 506 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PYCR2Q96C36 320 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 FAR2Q96K12 515 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PLEKHG4BQ96PX9 1271 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 SLC25A23Q9BV35 468 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 TTLL2Q9BWV7 592 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CORO1CQ9ULV4 474 aaPredicted RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PRPF19Q9UMS4 504 aaKnown RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 DOCK4Q8N1I0 1966 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 UPK3BL1B0FP48 263 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 UPK3BL2E5RIL1 263 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 NEDD8-MDP1E9PL57 170 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 TRIM38O00635 465 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 KERAO60938 352 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 LBPP18428 481 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 HNF1BP35680 557 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 HMGCS1Q01581 520 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CHRNA6Q15825 494 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 UGT3A2Q3SY77 523 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 ZNF648Q5T619 568 aaPredicted RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 AP1ARQ63HQ0 302 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CANT1Q8WVQ1 401 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PPP2R3CQ969Q6 453 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PPM1MQ96MI6 270 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 TMEM175Q9BSA9 504 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 ZNF385DQ9H6B1 395 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 ZDHHC4Q9NPG8 344 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 NDUFAF1Q9Y375 327 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 AP4S1Q9Y587 144 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 NUP214P35658 2090 aaPredicted RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 A0A1B0GTW7 788 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 INPP4BO15327 924 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 TGM5O43548 720 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CHEK2O96017 543 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 LMAN2Q12907 356 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 BOP1Q14137 746 aaKnown RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 TGFBIQ15582 683 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CACUL1Q86Y37 369 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 ING5Q8WYH8 240 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 MAELQ96JY0 434 aaKnown RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 ZNF599Q96NL3 588 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CDK5RAP1Q96SZ6 601 aaKnown RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 FARSBQ9NSD9 589 aaKnown RBP11.63□□□□□ -0.55
PDE6C-201ENST00000371447 SPG21Q9NZD8 308 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 LHX3Q9UBR4 397 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 ZNF225Q9UK10 706 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PFDN6O15212 129 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 OR6B1O95007 311 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 OGNP20774 298 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 HK2P52789 917 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 NTHL1P78549 312 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 SMARCB1Q12824 385 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 TRIM25Q14258 630 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 DGKKQ5KSL6 1271 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 NCEH1Q6PIU2 408 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 SPRED2Q7Z698 418 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 TADA1Q96BN2 335 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 TCEAL4Q96EI5 215 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 PAWRQ96IZ0 340 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 TSC22D3Q99576 134 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 VCX3BQ9H321 246 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 LSM7Q9UK45 103 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 LCHNA4D1U4 455 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 PRMT5O14744 637 aaPredicted RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 CXCL14O95715 111 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 F11P03951 625 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 UQCRBP14927 111 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 CDKL1Q00532 357 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 LRP8Q14114 963 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 CPSF6Q16630 551 aaKnown RBP eCLIP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 PHKG1Q16816 387 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 PLPP4Q5VZY2 271 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 RETSATQ6NUM9 610 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 LETMD1Q6P1Q0 360 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 GPRIN3Q6ZVF9 776 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 DHFR2Q86XF0 187 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 ZSWIM9Q86XI8 627 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 HJURPQ8NCD3 748 aaPredicted RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 OR2T11Q8NH01 316 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 GFM2Q969S9 779 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 PRPF18Q99633 342 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 C2orf49Q9BVC5 232 aaPredicted RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 LINC00597Q9H2U6 94 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 TFB2MQ9H5Q4 396 aaKnown RBP11.62□□□□□ -0.55
PDE6C-201ENST00000371447 IL26Q9NPH9 171 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 TBC1D30Q9Y2I9 924 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 AP4B1Q9Y6B7 739 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 A6NHS1 94 aa11.62□□□□□ -0.55
PDE6C-201ENST00000371447 S100BP04271 92 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms