RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 OR6K2Q8NGY2 324 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 OR2T3Q8NH03 318 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 PIH1D2Q8WWB5 315 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 CNBD2Q96M20 576 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 ACOX2Q99424 681 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 AIG1Q9NVV5 245 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 CPQQ9Y646 472 aa28.63■■■□□ 2.17
SSBP3-204ENST00000371320 CSPG5O95196 566 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 ZXDBP98169 803 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 CAPRIN1Q14444 709 aaKnown RBP28.62■■■□□ 2.17
SSBP3-204ENST00000371320 SLC15A3Q8IY34 581 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 SLC39A11Q8N1S5 342 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 ZNF296Q8WUU4 475 aaPredicted RBP28.62■■■□□ 2.17
SSBP3-204ENST00000371320 LRRC58Q96CX6 371 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 PLEKHG4BQ96PX9 1271 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 SLC52A3Q9NQ40 469 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 NUDT4Q9NZJ9 180 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 INSL5Q9Y5Q6 135 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 FXYD1O00168 92 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 GFRA2O00451 464 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 ZNF26P17031 533 aaPredicted RBP28.62■■■□□ 2.17
SSBP3-204ENST00000371320 GRIA3P42263 894 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 CDKL1Q00532 357 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 GRIK2Q13002 908 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 FAM151BQ6UXP7 276 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 Q6ZNB5 142 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 FRA10AC1Q70Z53 315 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 TSPEARQ8WU66 669 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 AUTS2Q8WXX7 1259 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 PDLIM5Q96HC4 596 aaKnown RBP28.62■■■□□ 2.17
SSBP3-204ENST00000371320 ZNF382Q96SR6 550 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 HERC2P3Q9BVR0 1158 aa28.62■■■□□ 2.17
SSBP3-204ENST00000371320 ZNF839A8K0R7 811 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 OR4F21O95013 312 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 URODP06132 367 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 FESP07332 822 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 KCNK10P57789 538 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 PTRHD1Q6GMV3 140 aaKnown RBP28.61■■■□□ 2.17
SSBP3-204ENST00000371320 TCEAL8Q8IYN2 117 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 APCDD1Q8J025 514 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 ZUFSPQ96AP4 578 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 SLC45A3Q96JT2 553 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 C2orf49Q9BVC5 232 aaPredicted RBP28.61■■■□□ 2.17
SSBP3-204ENST00000371320 RIC8BQ9NVN3 520 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 TSR3Q9UJK0 312 aaKnown RBP28.61■■■□□ 2.17
SSBP3-204ENST00000371320 ANAPC1Q9H1A4 1944 aa28.61■■■□□ 2.17
SSBP3-204ENST00000371320 ATP6V1B2P21281 511 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 MRPL19P49406 292 aaKnown RBP28.6■■■□□ 2.17
SSBP3-204ENST00000371320 RETSATQ6NUM9 610 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 PAF1Q8N7H5 531 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 CDYL2Q8N8U2 506 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 UHRF1Q96T88 793 aaPredicted RBP28.6■■■□□ 2.17
SSBP3-204ENST00000371320 CCT7Q99832 543 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 CLPBQ9H078 707 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 COQ10BQ9H8M1 238 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 CNOT6Q9ULM6 557 aaKnown RBP28.6■■■□□ 2.17
SSBP3-204ENST00000371320 A0A1W2PP18 115 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 HSD17B1P14061 328 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 SLC6A2P23975 617 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 GRIA2P42262 883 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 FOXM1Q08050 763 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 SERPINA9Q86WD7 417 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 DCBLD1Q8N8Z6 715 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 OR2T11Q8NH01 316 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 DDI1Q8WTU0 396 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 TRIM15Q9C019 465 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 CMTM6Q9NX76 183 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 EVLQ9UI08 416 aaPredicted RBP28.6■■■□□ 2.17
SSBP3-204ENST00000371320 AK5Q9Y6K8 562 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 TANC1Q9C0D5 1861 aa28.6■■■□□ 2.17
SSBP3-204ENST00000371320 MICAL3Q7RTP6 2002 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 SMAD6O43541 496 aaKnown RBP28.59■■■□□ 2.17
SSBP3-204ENST00000371320 AHCYL1O43865 530 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 PRAMEF1O95521 474 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 ZNF7P17097 686 aaPredicted RBP28.59■■■□□ 2.17
SSBP3-204ENST00000371320 ERVK-8P63133 956 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 BCL2L1Q07817 233 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 FAM117BQ6P1L5 589 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 ANKRD33Q7Z3H0 272 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 ADAMTSL2Q86TH1 951 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 OR52B6Q8NGF0 335 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 PPWD1Q96BP3 646 aaKnown RBP28.59■■■□□ 2.17
SSBP3-204ENST00000371320 TEX37Q96LM6 180 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 ZFYVE1Q9HBF4 777 aa28.59■■■□□ 2.17
SSBP3-204ENST00000371320 H0YJX3 145 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 SLC22A3O75751 556 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 BNIP2Q12982 314 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 RCAN2Q14206 197 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 NRF1Q16656 503 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 MTX3Q5HYI7 312 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 IRAK1BP1Q5VVH5 260 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 AMIGO2Q86SJ2 522 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 CANT1Q8WVQ1 401 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 VPS33AQ96AX1 596 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 CDK15Q96Q40 435 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 C1orf50Q9BV19 199 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 BRINP2Q9C0B6 783 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 CIPCQ9C0C6 399 aa28.58■■■□□ 2.17
SSBP3-204ENST00000371320 NOL11Q9H8H0 719 aaKnown RBP28.58■■■□□ 2.17
SSBP3-204ENST00000371320 PCDHGB4Q9UN71 923 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms