RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ECHS1P30084 290 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 CA5AP35218 305 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 GNPDA1P46926 289 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 CDKN1CP49918 316 aaPredicted RBP15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 LIMK1P53667 647 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 FASTKD3Q14CZ7 662 aaKnown RBP15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 ELOCQ15369 112 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 SHBQ15464 509 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 DBN1Q16643 649 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 KHDC1Q4VXA5 237 aaKnown RBP15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 RNF187Q5TA31 235 aaPredicted RBP15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 RD3Q7Z3Z2 195 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 LRRTM4Q86VH4 590 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 KCNMB4Q86W47 210 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 CCDC25Q86WR0 208 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 PALM2Q8IXS6 379 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 RBFAQ8N0V3 343 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 GSDMBQ8TAX9 411 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 SAP25Q8TEE9 199 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 UBXN4Q92575 508 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 CERS2Q96G23 380 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 CFAP36Q96G28 342 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 OR2M4Q96R27 311 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 FAM167BQ9BTA0 163 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 ARFGAP3Q9NP61 516 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 VPS9D1Q9Y2B5 631 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 CSNK1G3Q9Y6M4 447 aa15.35■□□□□ 0.05
PRPF38B-202ENST00000370022 KLHL33A6NCF5 533 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 KMOO15229 486 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 AP2A2O94973 939 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 FUCA1P04066 466 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 PRSS56P0CW18 603 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 ATP1B2P14415 290 aaPredicted RBP15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 ZNF7P17097 686 aaPredicted RBP15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 TNFRSF8P28908 595 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 MAGEA4P43358 317 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 ARHGAP8P85298 464 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 TYSND1Q2T9J0 566 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 ZNF648Q5T619 568 aaPredicted RBP15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 ZNF449Q6P9G9 518 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 MARK2Q7KZI7 788 aaKnown RBP15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 CILP2Q8IUL8 1156 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 OTUD6BQ8N6M0 293 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 RASGEF1AQ8N9B8 481 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 OR2I1PQ8NGU4 316 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 LRRC61Q9BV99 259 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 RXFP3Q9NSD7 469 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 ZNHIT2Q9UHR6 403 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 NFU1Q9UMS0 254 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 GPSM3Q9Y4H4 160 aa15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 DNMT3AQ9Y6K1 912 aaPredicted RBP15.34■□□□□ 0.05
PRPF38B-202ENST00000370022 AQP9O43315 295 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 KCNJ13O60928 360 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 SPAG6O75602 509 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 DGKAP23743 735 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 B4GALNT1Q00973 533 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 ILF3Q12906 894 aaKnown RBP eCLIP15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 SEMA3AQ14563 771 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 SLMAPQ14BN4 828 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 INAVAQ3KP66 663 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 BCL7AQ4VC05 210 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 PRRT3Q5FWE3 981 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 KCTD16Q68DU8 428 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 CYS1Q717R9 158 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 LRRC6Q86X45 466 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 TRAPPC5Q8IUR0 188 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 ZNF548Q8NEK5 533 aaPredicted RBP15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 GSDMCQ9BYG8 508 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 TCEAL2Q9H3H9 227 aaPredicted RBP15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 PLAC1Q9HBJ0 212 aa15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 INTS10Q9NVR2 710 aaKnown RBP15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 MARCH4Q9P2E8 410 aaPredicted RBP15.33■□□□□ 0.05
PRPF38B-202ENST00000370022 GOLGA8KD6RF30 607 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 GOLGA8TH3BQL2 631 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 TPP1O14773 563 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 NDUFS3O75489 264 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 GSTM1P09488 218 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 KCNA4P22459 653 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 ADARP55265 1226 aaKnown RBP15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 GSTM4Q03013 218 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 BNIP3Q12983 259 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 HSP90AA5PQ58FG0 334 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 STPG1Q5TH74 334 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 ZNF470Q6ECI4 717 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 LVRNQ6Q4G3 990 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 TMEM220Q6QAJ8 160 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 DBX2Q6ZNG2 339 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 KIAA0408Q6ZU52 694 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 GKN2Q86XP6 184 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 CNTN4Q8IWV2 1026 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 NETO1Q8TDF5 533 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 GPBAR1Q8TDU6 330 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 LMX1AQ8TE12 382 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 LINC00615Q96LM1 132 aaPredicted RBP15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 TIMM29Q9BSF4 260 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 TMEM168Q9H0V1 697 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 ANKZF1Q9H8Y5 726 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 VPS37BQ9H9H4 285 aa15.32■□□□□ 0.04
PRPF38B-202ENST00000370022 MOCS1Q9NZB8 636 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms