RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
LCA5-201ENST00000369846 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
LCA5-201ENST00000369846 MARF1Q9Y4F3 1742 aaKnown RBP8.51□□□□□ -1.05
LCA5-201ENST00000369846 SLIT1O75093 1534 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TNFRSF11BO00300 401 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 IL18RAPO95256 599 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 MSR1P21757 451 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 RAB39AQ14964 217 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 C10orf120Q5SQS8 335 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 CLEC6AQ6EIG7 209 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PAOXQ6QHF9 649 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 BBS12Q6ZW61 710 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 IRF2BP1Q8IU81 584 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ZSCAN1Q8NBB4 408 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 AGBL3Q8NEM8 1001 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 OR6C4Q8NGE1 309 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SLC22A8Q8TCC7 542 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SMARCD1Q96GM5 515 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ZNF471Q9BX82 626 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 POLR3HQ9Y535 204 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 TIMM22Q9Y584 194 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SOCS7O14512 581 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PLIN3O60664 434 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 IPO13O94829 963 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 VNN2O95498 520 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 CD4P01730 458 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 IRF1P10914 325 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 HPCAL1P37235 193 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 NR2C2P49116 596 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 HARS2P49590 506 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 GTF2A2P52657 109 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ZNF135P52742 658 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 SMIM11AP58511 58 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ADAM8P78325 824 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TMEM62Q0P6H9 643 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SPP2Q13103 211 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 BIKQ13323 160 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 MAMLD1Q13495 774 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 BAATQ14032 418 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 KCNJ8Q15842 424 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 CCDC58Q4VC31 144 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PPP1R26Q5T8A7 1209 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 PRAMEF17Q5VTA0 474 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ARSKQ6UWY0 536 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TMEM17Q86X19 198 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TOMM5Q8N4H5 51 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 METTL25Q8N6Q8 603 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 LILRB4Q8NHJ6 448 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PTCD2Q8WV60 388 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 FAM84BQ96KN1 310 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 ZNF395Q9H8N7 513 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 PAK6Q9NQU5 681 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 ZNF69Q9UC07 566 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ST3GAL5Q9UNP4 418 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TMEM5Q9Y2B1 443 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SPIN1Q9Y657 262 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 C5P01031 1676 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ISM1B1AKI9 464 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 WRBO00258 174 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PPEF2O14830 753 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 FGRP09769 529 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PEPDP12955 493 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SLC6A2P23975 617 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 ERP29P30040 261 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 LIMK2P53671 638 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 CDH8P55286 799 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 GCNT1Q02742 428 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 PPP3CAQ08209 521 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 MOB2Q70IA6 237 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TFAP2DQ7Z6R9 452 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PSTKQ8IV42 348 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 ATAD1Q8NBU5 361 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 NETO2Q8NC67 525 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 DAGLBQ8NCG7 672 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SNAPC3Q92966 411 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TMEM176AQ96HP8 235 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 C12orf66Q96MD2 445 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 HBEGFQ99075 208 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 UCK2Q9BZX2 261 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SLC7A5P2Q9GIP4 190 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 CST11Q9H112 138 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 FAM83DQ9H4H8 585 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 TESMINQ9Y4I5 508 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 CLCA1A8K7I4 914 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 HCN1O60741 890 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 MLYCDO95822 493 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 CDK4P11802 303 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 RPS2P15880 293 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 CPN2P22792 545 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 PRDX6P30041 224 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 RPL4P36578 427 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 MPP1Q00013 466 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 KYAT1Q16773 422 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 MEP1AQ16819 746 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 RBM48Q5RL73 367 aaKnown RBP8.5□□□□□ -1.05
LCA5-201ENST00000369846 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 DET1Q7L5Y6 550 aa8.5□□□□□ -1.05
LCA5-201ENST00000369846 SCML4Q8N228 414 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms