RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SYNCRIPO60506 623 aaKnown RBP16.61■□□□□ 0.25
PHGDH-202ENST00000369409 MTX2O75431 263 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 SLC25A14O95258 325 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-202ENST00000369409 ASGR2P07307 311 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 C6P13671 934 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 CCR10P46092 362 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 ATP6V0D1P61421 351 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 SATB1Q01826 763 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 ASPHQ12797 758 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 RCN2Q14257 317 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 E2F5Q15329 346 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 TSNQ15631 228 aaKnown RBP16.61■□□□□ 0.25
PHGDH-202ENST00000369409 CST6Q15828 149 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 RALGPS2Q86X27 583 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-202ENST00000369409 SLC44A3Q8N4M1 653 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 CCNYL1Q8N7R7 359 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 RHEBL1Q8TAI7 183 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 PPM1EQ8WY54 764 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 KIAA1191Q96A73 305 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 AP2M1Q96CW1 435 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 CCDC126Q96EE4 140 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 DTD2Q96FN9 168 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 TMEM237Q96Q45 408 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 ATOH8Q96SQ7 321 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 TMEM120AQ9BXJ8 343 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 HDAC8Q9BY41 377 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 CDH19Q9H159 772 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 TRPV5Q9NQA5 729 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 UBXN8O00124 270 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 CDC7O00311 574 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 KERAO60938 352 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 IPO13O94829 963 aaKnown RBP16.61■□□□□ 0.25
PHGDH-202ENST00000369409 CHRNGP07510 517 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 DRD3P35462 400 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 PIP5KL1Q5T9C9 394 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 DET1Q7L5Y6 550 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 TRPM8Q7Z2W7 1104 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 NRSN1Q8IZ57 195 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 AADATQ8N5Z0 425 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 PIWIL2Q8TC59 973 aaKnown RBP16.61■□□□□ 0.25
PHGDH-202ENST00000369409 PHF21BQ96EK2 531 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 DRC3Q9H069 523 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 KCNK13Q9HB14 408 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 NCKIPSDQ9NZQ3 722 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 RNF112Q9ULX5 631 aa16.61■□□□□ 0.25
PHGDH-202ENST00000369409 MMP20O60882 483 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 RNASEH1O60930 286 aaKnown RBP16.6■□□□□ 0.25
PHGDH-202ENST00000369409 SMIM24O75264 130 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 KIAA0754O94854 1291 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 NTSR1P30989 418 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 ARFIP2P53365 341 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 DNAJB13P59910 316 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 IER5LQ5T953 404 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 KIAA1211LQ6NV74 962 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 TRIM67Q6ZTA4 783 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 ZNF781Q8N8C0 355 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 DTX3LQ8TDB6 740 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 INPP5DQ92835 1189 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 DNASE1L2Q92874 299 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 NUS1Q96E22 293 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 PHF7Q9BWX1 381 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-202ENST00000369409 PNPOQ9NVS9 261 aa16.6■□□□□ 0.25
PHGDH-202ENST00000369409 ATXN2Q99700 1313 aaKnown RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 CCT8L1PA6NM43 557 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 SUPT3HB4E1H0 165 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 SUPT3HO75486 399 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 RECQL5O94762 991 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 ADH1BP00325 375 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 TMEM52BQ4KMG9 183 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 KHDC1Q4VXA5 237 aaKnown RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 TMEM196Q5HYL7 178 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 CFAP157Q5JU67 520 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 PIWIL4Q7Z3Z4 852 aaKnown RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 CYP2U1Q7Z449 544 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 SLC22A9Q8IVM8 553 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 ZBTB2Q8N680 514 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 IL17RCQ8NAC3 791 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 DDHD1Q8NEL9 900 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 STAG3L4Q8TBR4 150 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 AGR3Q8TD06 166 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 CXorf40AQ8TE69 158 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 RAB7BQ96AH8 199 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 DCUN1D1Q96GG9 259 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 C8orf33Q9H7E9 229 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 MBD1Q9UIS9 605 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 TRPM6Q9BX84 2022 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 NARSO43776 548 aaKnown RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 LZTS3O60299 673 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 KLF8O95600 359 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 OR56A5P0C7T3 313 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 MTHFD2P13995 350 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 ATP1B2P14415 290 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 MPSTP25325 297 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 AQP5P55064 265 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 NFKB2Q00653 900 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 MLLT1Q03111 559 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-202ENST00000369409 STARD3Q14849 445 aa16.59■□□□□ 0.25
PHGDH-202ENST00000369409 ARL13AQ5H913 290 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms