RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TMC8Q8IU68 726 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 MIER2Q8N344 545 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 PNPLA1Q8N8W4 532 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 GDPD5Q8WTR4 605 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 FAM136AQ96C01 138 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 LINGO1Q96FE5 620 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 LYSMD1Q96S90 227 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 TNFRSF12AQ9NP84 129 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 ASAH2Q9NR71 780 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 SPATS2LQ9NUQ6 558 aaKnown RBP13.88□□□□□ -0.19
USF1-202ENST00000368020 NDUFAF1Q9Y375 327 aa13.88□□□□□ -0.19
USF1-202ENST00000368020 ATG2AQ2TAZ0 1938 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 NPEPPSL1A6NEC2 478 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CAPN8A6NHC0 703 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 SIX3O95343 332 aaPredicted RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 TSPAN12O95859 305 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CDH13P55290 713 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PSME3P61289 254 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 DUSP6Q16828 381 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 KIF19Q2TAC6 998 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PLEKHG6Q3KR16 790 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 SAMD4BQ5PRF9 694 aaKnown RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 RARS2Q5T160 578 aaKnown RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 ATXN7L2Q5T6C5 722 aaPredicted RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 REP15Q6BDI9 236 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PTRHD1Q6GMV3 140 aaKnown RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 GK5Q6ZS86 529 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 FRA10AC1Q70Z53 315 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 LYSMD3Q7Z3D4 306 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 DDIASQ8IXT1 998 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 OR2AP1Q8NGE2 309 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 SH3RF2Q8TEC5 729 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 TRPC4APQ8TEL6 797 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 ZNF382Q96SR6 550 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 AKTIPQ9H8T0 292 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 BPIFA1Q9NP55 256 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 RIC8BQ9NVN3 520 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CD274Q9NZQ7 290 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CCDC167Q9P0B6 97 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PCTPQ9UKL6 214 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 MTF2Q9Y483 593 aaPredicted RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 PRRC2BQ5JSZ5 2229 aaKnown RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 TRBV5-4A0A0C4DH59 114 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 C1orf232A0A0U1RR37 186 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 MRASO14807 208 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PIP5K1BO14986 540 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CFLARO15519 480 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 NIPSNAP2O75323 286 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PAPLNO95428 1278 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PRAMEF1O95521 474 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 C8AP07357 584 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 POU2F2P09086 479 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
USF1-202ENST00000368020 PRSS56P0CW18 603 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CLCN7P51798 805 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 NFATC2Q13469 925 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 LRP8Q14114 963 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PPP1R3AQ16821 1122 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 ANO7Q6IWH7 933 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CYHR1Q6ZMK1 362 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 RPS27LQ71UM5 84 aaKnown RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 PQLC1Q8N2U9 271 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 SIDT2Q8NBJ9 832 aaKnown RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 NPAS2Q99743 824 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 HOPXQ9BPY8 73 aaPredicted RBP13.87□□□□□ -0.19
USF1-202ENST00000368020 LRRC3Q9BY71 257 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 TM6SF2Q9BZW4 377 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CEP44Q9C0F1 390 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 KLHL42Q9P2K6 505 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 SCOCQ9UIL1 159 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 ZMYM5Q9UJ78 669 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 CROTQ9UKG9 612 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 PCDHGA7Q9Y5G6 932 aa13.87□□□□□ -0.19
USF1-202ENST00000368020 MAGEA13PA6NCF6 341 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 CDC7O00311 574 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 RAD51BO15315 384 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 OR1I1O60431 355 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 SPATA31D3P0C874 917 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 DGKAP23743 735 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 SPAM1P38567 509 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 CDKN1CP49918 316 aaPredicted RBP13.86□□□□□ -0.19
USF1-202ENST00000368020 CYP4F8P98187 520 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 FOXM1Q08050 763 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 LMAN2Q12907 356 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 TRIM25Q14258 630 aaKnown RBP13.86□□□□□ -0.19
USF1-202ENST00000368020 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 PCBP2Q15366 365 aaKnown RBP eCLIP13.86□□□□□ -0.19
USF1-202ENST00000368020 MAP7D1Q3KQU3 841 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 TTLL9Q3SXZ7 439 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 SPATA31D4Q6ZUB0 917 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 USP45Q70EL2 814 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 BBS7Q8IWZ6 715 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 APCDD1Q8J025 514 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 PIP4K2CQ8TBX8 421 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 WFDC5Q8TCV5 224 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 EEF1AKMT1Q8WVE0 214 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 TUBGCP3Q96CW5 907 aa13.86□□□□□ -0.19
USF1-202ENST00000368020 BTBD9Q96Q07 612 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms