RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 C2orf81A6NN90 581 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 PGRMC1O00264 195 aaKnown RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 ATXN7O15265 892 aaPredicted RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 GRID2O43424 1007 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 LDB2O43679 373 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 DXOO77932 396 aaKnown RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 APRTP07741 180 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 RPIAP49247 311 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 CDKN1CP49918 316 aaPredicted RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 PCBP4P57723 403 aaKnown RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 CXADRP78310 365 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 C14orf28Q4W4Y0 310 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 CERCAMQ5T4B2 595 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 GPRC6AQ5T6X5 926 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 GPR155Q7Z3F1 870 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 TRAPPC5Q8IUR0 188 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 NAGSQ8N159 534 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 RASGEF1CQ8N431 466 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 BEND7Q8N7W2 519 aaPredicted RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 DNAAF3Q8N9W5 541 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 GPR156Q8NFN8 814 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 MAIP1Q8WWC4 291 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 SCARF2Q96GP6 870 aaPredicted RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 ATXN7L3BQ96GX2 97 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 PPP1R2P1Q96PQ5 205 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 SRPK1Q96SB4 655 aaKnown RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 ASCL3Q9NQ33 180 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 SLC23A2Q9UGH3 650 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 ATXN7L1Q9ULK2 861 aaPredicted RBP14.47□□□□□ -0.09
SF3B5-201ENST00000367569 SNX12Q9UMY4 172 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 SATB2Q9UPW6 733 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 ENTPD2Q9Y5L3 495 aa14.47□□□□□ -0.09
SF3B5-201ENST00000367569 FANCGO15287 622 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 NUAK1O60285 661 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 ZNF189O75820 626 aaPredicted RBP14.46□□□□□ -0.09
SF3B5-201ENST00000367569 C1QL1O75973 258 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 CRTAMO95727 393 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 RPLP0P05388 317 aaKnown RBP14.46□□□□□ -0.09
SF3B5-201ENST00000367569 STIP1P31948 543 aaKnown RBP14.46□□□□□ -0.09
SF3B5-201ENST00000367569 MC4RP32245 332 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 FDFT1P37268 417 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 CTSCP53634 463 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 ERVPABLB-1P60509 514 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 CRADDP78560 199 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 CCL7P80098 99 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 SEMA5AQ13591 1074 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 PEX6Q13608 980 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 HLTFQ14527 1009 aaKnown RBP eCLIP14.46□□□□□ -0.09
SF3B5-201ENST00000367569 C3orf38Q5JPI3 329 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 LVRNQ6Q4G3 990 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 RAVER1Q8IY67 606 aaKnown RBP14.46□□□□□ -0.09
SF3B5-201ENST00000367569 BRSK1Q8TDC3 778 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 MAGOHBQ96A72 148 aaKnown RBP14.46□□□□□ -0.09
SF3B5-201ENST00000367569 LRRC45Q96CN5 670 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 PBKQ96KB5 322 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 VPS35Q96QK1 796 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 ASB8Q9H765 288 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 TRIM39Q9HCM9 518 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 KLC4Q9NSK0 619 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 PAK5Q9P286 719 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 TBC1D29Q9UFV1 150 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 SLC2A6Q9UGQ3 507 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 CRLS1Q9UJA2 301 aa14.46□□□□□ -0.09
SF3B5-201ENST00000367569 TEX51A0A1B0GUA7 166 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 TCRBV7S3A2A0A539 114 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 TK2O00142 265 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 SRP72O76094 671 aaKnown RBP14.45□□□□□ -0.1
SF3B5-201ENST00000367569 CDK14O94921 469 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 PPM1FP49593 454 aaPredicted RBP14.45□□□□□ -0.1
SF3B5-201ENST00000367569 ARSDP51689 593 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 PDX1P52945 283 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 DRG2P55039 364 aaKnown RBP14.45□□□□□ -0.1
SF3B5-201ENST00000367569 SESN2P58004 480 aaPredicted RBP14.45□□□□□ -0.1
SF3B5-201ENST00000367569 XIAPP98170 497 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 BIRC2Q13490 618 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 GTF2H3Q13889 308 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 AMZ1Q400G9 498 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 ZRANB3Q5FWF4 1079 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 PDPK2PQ6A1A2 396 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 PCSK4Q6UW60 755 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 RBM44Q6ZP01 1051 aaKnown RBP14.45□□□□□ -0.1
SF3B5-201ENST00000367569 LRRTM4Q86VH4 590 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 CCNJLQ8IV13 435 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 ZNF547Q8IVP9 402 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 RASGEF1AQ8N9B8 481 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 SLC37A2Q8TED4 501 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 NAT6Q93015 286 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 PRR11Q96HE9 360 aaPredicted RBP14.45□□□□□ -0.1
SF3B5-201ENST00000367569 FOXP3Q9BZS1 431 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 ZMYND15Q9H091 742 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 ARNT2Q9HBZ2 717 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 PRDM8Q9NQV8 689 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 LRIT1Q9P2V4 623 aa14.45□□□□□ -0.1
SF3B5-201ENST00000367569 A0A1W2PQM1 296 aa14.44□□□□□ -0.1
SF3B5-201ENST00000367569 PDZK1P1A8MUH7 402 aa14.44□□□□□ -0.1
SF3B5-201ENST00000367569 KRT14P02533 472 aa14.44□□□□□ -0.1
SF3B5-201ENST00000367569 OR1D5P58170 312 aa14.44□□□□□ -0.1
SF3B5-201ENST00000367569 CDH17Q12864 832 aa14.44□□□□□ -0.1
SF3B5-201ENST00000367569 TMEM115Q12893 351 aaPredicted RBP14.44□□□□□ -0.1
SF3B5-201ENST00000367569 GPS1Q13098 491 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms