RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 OLIG2Q13516 323 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 BHLHB9Q6PI77 547 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 TPRG1Q6ZUI0 275 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 CDK20Q8IZL9 346 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 UMODL1-AS1Q8N2C9 162 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 KLHDC9Q8NEP7 349 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 IGSF8Q969P0 613 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 KRT84Q9NSB2 600 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 FBXL12Q9NXK8 326 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 NIPSNAP2O75323 286 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 HLA-EP13747 358 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 CHRNA6Q15825 494 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 ZNF776Q68DI1 518 aaPredicted RBP13.74□□□□□ -0.21
CTR9-201ENST00000361367 C19orf60Q96EN9 201 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 TSGA13Q96PP4 275 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 NKX2-4Q9H2Z4 354 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 ZDHHC3Q9NYG2 299 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 KLHL3Q9UH77 587 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 SUFUQ9UMX1 484 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 MYH4Q9Y623 1939 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 MTX2O75431 263 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 SLC22A3O75751 556 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 RECQL5O94762 991 aaPredicted RBP13.74□□□□□ -0.21
CTR9-201ENST00000361367 NUDT14O95848 222 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 C8GP07360 202 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 ZNHIT3Q15649 155 aaPredicted RBP13.74□□□□□ -0.21
CTR9-201ENST00000361367 SULT1C3Q6IMI6 304 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 SLC39A11Q8N1S5 342 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 ESAMQ96AP7 390 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 RCN3Q96D15 328 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 OR52E6Q96RD3 313 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 MYCBPQ99417 103 aaPredicted RBP13.74□□□□□ -0.21
CTR9-201ENST00000361367 PACSIN3Q9UKS6 424 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 CREB1P16220 341 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 PIK3R1P27986 724 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 USP46P62068 366 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 ZFP1Q6P2D0 407 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 OR6Y1Q8NGX8 325 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 TLCD1Q96CP7 247 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 SHDQ96IW2 340 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 C7orf26Q96N11 449 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 KLHL4Q9C0H6 718 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 LRTM1Q9HBL6 345 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 SPAG4Q9NPE6 437 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 MAFFQ9ULX9 164 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 MRPS33Q9Y291 106 aaKnown RBP13.74□□□□□ -0.21
CTR9-201ENST00000361367 ADAMTS7Q9UKP4 1686 aa13.74□□□□□ -0.21
CTR9-201ENST00000361367 SNTNA6NMZ2 147 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 RFXANKO14593 260 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 NBNO60934 754 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 TGDSO95455 350 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 PSMC3P17980 439 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 VIPR1P32241 457 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 UBE3AQ05086 875 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 CHIT1Q13231 466 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 FGD3Q5JSP0 725 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 PAQR3Q6TCH7 311 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 STK32CQ86UX6 486 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 EID3Q8N140 333 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 NELL1Q92832 810 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 FEM1AQ9BSK4 669 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 ZSCAN5AQ9BUG6 496 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 YIPF3Q9GZM5 350 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 SLC2A6Q9UGQ3 507 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 THSD7AQ9UPZ6 1657 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 ACTR1BP42025 376 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 BLKP51451 505 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 CCR4P51679 360 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 ACTR1AP61163 376 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 MRPS22P82650 360 aaKnown RBP13.73□□□□□ -0.21
CTR9-201ENST00000361367 ZNF549Q6P9A3 640 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 CCDC81Q6ZN84 652 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 BANPQ8N9N5 519 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 TWIST2Q8WVJ9 160 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 PPCDCQ96CD2 204 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 EIF2B4Q9UI10 523 aaKnown RBP13.73□□□□□ -0.21
CTR9-201ENST00000361367 GON4LQ3T8J9 2241 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 EPOP01588 193 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 ATP6V1B1P15313 513 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 TEAD4Q15561 434 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 CLEC6AQ6EIG7 209 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 FAM171BQ6P995 826 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 IZUMO2Q6UXV1 221 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 TMEM26Q6ZUK4 368 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 CLHC1Q8NHS4 586 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 FBXO30Q8TB52 745 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 TOP1MTQ969P6 601 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 C12orf66Q96MD2 445 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 ELOVL2Q9NXB9 296 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 MAST2Q6P0Q8 1798 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 PIPSLA2A3N6 862 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 PRR5-ARHGAP8B1AHC4 643 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 TMEM189-UBE2V1I3L0A0 370 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 AGPSO00116 658 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 FFAR2O15552 330 aa13.73□□□□□ -0.21
CTR9-201ENST00000361367 ZNF30P17039 623 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms