RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 GIN1Q9NXP7 522 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 TRAF6Q9Y4K3 522 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 LOC285095A0A1B0GVY8 99 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 GMNNO75496 209 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 WISP3O95389 354 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 INHBBP09529 407 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 SLC2A3P11169 496 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 PABPC1P11940 636 aaKnown RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 NCK1P16333 377 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 ATF6P18850 670 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 MAGP20916 626 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 IDUAP35475 653 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 SLC11A1P49279 550 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 TRIP4Q15650 581 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 ZNF678Q5SXM1 525 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 THOC7Q6I9Y2 204 aaKnown RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 CCDC117Q8IWD4 279 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 TEX26Q8N6G2 289 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 PTGR2Q8N8N7 351 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 ATP6V0D2Q8N8Y2 350 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 GLT1D1Q96MS3 346 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 MFSD1Q9H3U5 465 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 VPS28Q9UK41 221 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 CROTQ9UKG9 612 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 TMEM98Q9Y2Y6 226 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 UBDO15205 165 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 CD3EAPO15446 510 aaKnown RBP16.04■□□□□ 0.16
IFT140-201ENST00000361339 AQP9O43315 295 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 TSPAN3O60637 253 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 C8BP07358 591 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 CES1P23141 567 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 TPTEP56180 551 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 DNAJB13P59910 316 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 NRG1Q02297 640 aaPredicted RBP16.04■□□□□ 0.16
IFT140-201ENST00000361339 GRB7Q14451 532 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 ZNF235Q14590 738 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 GPNMBQ14956 572 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 NFE2Q16621 373 aaPredicted RBP16.04■□□□□ 0.16
IFT140-201ENST00000361339 C6orf10Q5SRN2 563 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 SCIMPQ6UWF3 145 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 DBF4BQ8NFT6 615 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 BPIFA1Q9NP55 256 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 LTB4R2Q9NPC1 389 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 ATAD3AQ9NVI7 634 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 XYLBO75191 536 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 ESRRBO95718 433 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 CD1DP15813 335 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 TACR2P21452 398 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 FMO4P31512 558 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 FPGSQ05932 587 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 LINGO4Q6UY18 593 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 KIAA0408Q6ZU52 694 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 CAMK1DQ8IU85 385 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 STARD8Q92502 1023 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 BHMTQ93088 406 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 EHD1Q9H4M9 534 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 ZFP37Q9Y6Q3 630 aaPredicted RBP16.04■□□□□ 0.16
IFT140-201ENST00000361339 CDH23Q9H251 3354 aa16.04■□□□□ 0.16
IFT140-201ENST00000361339 INPP4BO15327 924 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 SLC7A4O43246 635 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 SRP72O76094 671 aaKnown RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 BAIAP3O94812 1187 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 MTHFD2P13995 350 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 HOXD9P28356 352 aaPredicted RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 PRDX3P30048 256 aaKnown RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 HTR7P34969 479 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 CASP2P42575 452 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 ACADVLP49748 655 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 ACAP2Q15057 778 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 PLA2G4EQ3MJ16 856 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 FUT11Q495W5 492 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 C16orf59Q7L2K0 433 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 RETREG3Q86VR2 466 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 FUNDC1Q8IVP5 155 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 CMTR2Q8IYT2 770 aaKnown RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 TADA1Q96BN2 335 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 CCDC68Q9H2F9 335 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 MEAF6Q9HAF1 191 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 KIAA1522Q9P206 1035 aaPredicted RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 SUCOQ9UBS9 1254 aaKnown RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 MED16Q9Y2X0 877 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 PCDHGC4Q9Y5F7 938 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 SOBPA7XYQ1 873 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 SLCO1B7G3V0H7 640 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 PSMD11O00231 422 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 NBNO60934 754 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 IRF1P10914 325 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 STX5Q13190 355 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 GEN1Q17RS7 908 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 KIF19Q2TAC6 998 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 SETMARQ53H47 684 aaPredicted RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 CALML6Q8TD86 181 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 TRPC4APQ8TEL6 797 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 BEGAINQ9BUH8 593 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 IFT80Q9P2H3 777 aaPredicted RBP16.03■□□□□ 0.16
IFT140-201ENST00000361339 DNAJC15Q9Y5T4 150 aa16.03■□□□□ 0.16
IFT140-201ENST00000361339 TRPC5OSA6NMA1 111 aa16.02■□□□□ 0.16
IFT140-201ENST00000361339 NR5A2O00482 541 aa16.02■□□□□ 0.16
IFT140-201ENST00000361339 OR1I1O60431 355 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms