RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 LINGO1Q96FE5 620 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TLL2Q9Y6L7 1015 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TMEM94Q12767 1356 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CLCA1A8K7I4 914 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SPARCP09486 303 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ADAM15Q13444 863 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SV2AQ7L0J3 742 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SLC2A14Q8TDB8 520 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF490Q9ULM2 529 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 FRMPD4Q14CM0 1322 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 VTNP04004 478 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 GTF2A2P52657 109 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 COQ8BQ96D53 544 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZFP3Q96NJ6 502 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 MIPEPQ99797 713 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CXorf21Q9HAI6 301 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF157P51786 506 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 DRG2P55039 364 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PFKPQ01813 784 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SP140Q13342 867 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CPSF6Q16630 551 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PPP1R15BQ5SWA1 713 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CHERPQ8IWX8 916 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 GPR65Q8IYL9 337 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 GHDCQ8N2G8 530 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 NPAS2Q99743 824 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CYP3A7-CYP3A51PA0A087WV96 503 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CYP3A7P24462 503 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PCBP1Q15365 356 aaKnown RBP eCLIP9.23□□□□□ -0.936e-6■□□□□ 8.7
VPS13A-203ENST00000360280 ASB12Q8WXK4 309 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SLC39A3Q9BRY0 314 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ELAC1Q9H777 363 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 NCOA3Q9Y6Q9 1424 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CAPN8A6NHC0 703 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 M0R129 80 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 GCNT6Q5T4J0 391 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SYCE2Q6PIF2 218 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF227Q86WZ6 799 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF709Q8N972 641 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZSCAN5AQ9BUG6 496 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 LRTM1Q9HBL6 345 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 DNAJC28Q9NX36 388 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 HPSEQ9Y251 543 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PLA2R1Q13018 1463 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CLCN3P51790 818 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 USP4Q13107 963 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 AUHQ13825 339 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 C1orf216Q8TAB5 229 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 MARCH2Q9P0N8 246 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 COPS7AQ9UBW8 275 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TEX13CA0A0J9YWL9 993 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 C1QTNF3-AMACRE9PGA6 284 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 EML1O00423 815 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 NDUFS2O75306 463 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 NME6O75414 186 aaPredicted RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 MSL3P1P0C860 447 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 GSTT2P0CG29 244 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 APLP1P51693 650 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 FAM46CQ5VWP2 391 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ZPBP2Q6X784 338 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF347Q96SE7 839 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 MCMBPQ9BTE3 642 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ASB7Q9H672 318 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ARL5AQ9Y689 179 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 LIASO43766 372 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF143P52747 638 aaPredicted RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 SLC5A3P53794 718 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 MXD1Q05195 221 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 KCTD8Q6ZWB6 473 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CLNKQ7Z7G1 428 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CD320Q9NPF0 282 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 POMCP01189 267 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 FAM171A1Q5VUB5 890 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 SERPINA13PQ6UXR4 307 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 TXNRD3Q86VQ6 643 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 OR4L1Q8NH43 312 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 FAM151AQ8WW52 585 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CREB3L1Q96BA8 519 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 DHX33Q9H6R0 707 aaKnown RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CALML5Q9NZT1 146 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ITGA10O75578 1167 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 IFNA2P01563 188 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF823P16415 610 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 WSCD2Q2TBF2 565 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CCNYL2Q5T2Q4 361 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 SSX6Q7RTT6 188 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 WNT8BQ93098 351 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CEP295NLQ96MC4 621 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 NELFAQ9H3P2 528 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ENY2Q9NPA8 101 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 UBQLN2Q9UHD9 624 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ATG13O75143 517 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 ASLP04424 464 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 NELFEP18615 380 aaKnown RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 RPS12P25398 132 aaKnown RBP9.22□□□□□ -0.93
VPS13A-203ENST00000360280 KLRC2P26717 231 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 S100A10P60903 97 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CRHR1P34998 444 aa9.22□□□□□ -0.93
VPS13A-203ENST00000360280 CRADDP78560 199 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms