RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TMEM150CB9EJG8 249 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 HNF4AP41235 474 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 NRF1Q16656 503 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 C3orf67Q6ZVT6 689 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 OR2L3Q8NG85 312 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 OR14C36Q8NHC7 312 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 DNAJB8Q8NHS0 232 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 FARSBQ9NSD9 589 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 TRAF6Q9Y4K3 522 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PSIP1O75475 530 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 EPHX1P07099 455 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 ADAM8P78325 824 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PAMR1Q6UXH9 720 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 APOLD1Q96LR9 279 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 SLC25A52Q3SY17 297 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 GXYLT1Q4G148 440 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 MAB21L3Q8N8X9 362 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 HIPK3Q9H422 1215 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 ARCN1P48444 511 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 MRPS5P82675 430 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 APOBEC3HQ6NTF7 200 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 LRTM1Q9HBL6 345 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 GLOD4Q9HC38 313 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 DIP2BQ9P265 1576 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PI4KAP42356 2102 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 BCKDKO14874 412 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 AP1S1P61966 158 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 IL18Q14116 193 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 MED22Q15528 200 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 TYSND1Q2T9J0 566 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 FAM13CQ8NE31 585 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 BRSK1Q8TDC3 778 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 LRRC19Q9H756 370 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 RAB26Q9ULW5 256 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PLIN3O60664 434 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 ITGA3P26006 1051 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 TAF5Q15542 800 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 FSTL5Q8N475 847 aaPredicted RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 MCMBPQ9BTE3 642 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 NPEPPSL1A6NEC2 478 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 DHX15O43143 795 aaKnown RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 CDC40O60508 579 aaKnown RBP eCLIP9.6□□□□□ -0.87
CUX1-203ENST00000360264 USP12O75317 370 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 TOP3BO95985 862 aaKnown RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 LLGL2Q6P1M3 1020 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 OR2T12Q8NG77 320 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 OR4C6Q8NH72 309 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 BORCS5Q969J3 196 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 ABCA4P78363 2273 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 SCGNO76038 276 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 TAF10Q12962 218 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 NIPAL1Q6NVV3 410 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CHST9Q7L1S5 443 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 ADGRG6Q86SQ4 1221 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 AZIN2Q96A70 460 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CAMK1GQ96NX5 476 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 IKZF2Q9UKS7 526 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 PLLPQ9Y342 182 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 PEX16Q9Y5Y5 336 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 SH3BGRLO75368 114 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 C1RP00736 705 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CCKBRP32239 447 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CRHR1P34998 444 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 GET4Q7L5D6 327 aaPredicted RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 TMPRSS11BQ86T26 416 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 MBOAT7Q96N66 472 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 ROBO3Q96MS0 1386 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 ALAS2P22557 587 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 GSTT1P30711 240 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 PTPN5P54829 565 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 RUNDC3AQ59EK9 446 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CCDC107Q8WV48 283 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 PIH1D1Q9NWS0 290 aaKnown RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 TUBA8Q9NY65 449 aaPredicted RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 hCG_1818297A0A087WSY0 165 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CBFA2T3O75081 653 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 RENP00797 406 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 RHOQP17081 205 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CNTN2Q02246 1040 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 PPIGQ13427 754 aaKnown RBP eCLIP9.6□□□□□ -0.878e-7■■■□□ 18.1
CUX1-203ENST00000360264 DEFB115Q30KQ5 88 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 C7orf57Q8NEG2 295 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 SMG7Q92540 1137 aaKnown RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 TLR5O60602 858 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 LINC00032P0C843 101 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CCR8P51685 355 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 C15orf59Q2T9L4 293 aaPredicted RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
CUX1-203ENST00000360264 FAM124AQ86V42 546 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 FAM129BQ96TA1 746 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 BPGMP07738 259 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CYP3A5P20815 502 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 CD247P20963 164 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 UGT1A3P35503 534 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 DUPD1Q68J44 220 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 ZCCHC23Q6ZST2 131 aa9.6□□□□□ -0.87
CUX1-203ENST00000360264 GAL3ST3Q96A11 431 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms