RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SEMA4BQ9NPR2 832 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 CCL26Q9Y258 94 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 TNPO3Q9Y5L0 923 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 NOTCH4Q99466 2003 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 PIP5K1BO14986 540 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 TLL1O43897 1013 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 XYLBO75191 536 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 MOSPD3O75425 235 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 ESRRBO95718 433 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 BAG2O95816 211 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 RHOP08100 348 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 UROSP10746 265 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 PABPC1P11940 636 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 TCF3P15923 654 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 LBPP18428 481 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 ME2P23368 584 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 DGKAP23743 735 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 STK19P49842 368 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 PKNOX1P55347 436 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 ZNF423Q2M1K9 1284 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 ELMSAN1Q6PJG2 1045 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 HACD2Q6Y1H2 254 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 MACC1Q6ZN28 852 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 DDIASQ8IXT1 998 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 PLPP6Q8IY26 295 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 HMGCLL1Q8TB92 370 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 SPPL3Q8TCT6 385 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 IRF7Q92985 503 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 OTUB2Q96DC9 234 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 TCEAL4Q96EI5 215 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 C3orf30Q96M34 536 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 NPAS2Q99743 824 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 CCT7Q99832 543 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 HGH1Q9BTY7 390 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 BBS2Q9BXC9 721 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 CIPCQ9C0C6 399 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 PIKFYVEQ9Y2I7 2098 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 PDE4DIPQ5VU43 2346 aa18.09■□□□□ 0.49
PDLIM7-203ENST00000359895 NCF1BA6NI72 391 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 BBIP1A8MTZ0 92 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 NCF1CA8MVU1 366 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 NEDD8-MDP1E9PL57 170 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 PPP6CO00743 305 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 CFLARO15519 480 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 SORBS2O94875 1100 aaKnown RBP18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 NCF1P14598 390 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 HK3P52790 923 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 TGFBIQ15582 683 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 CHRNA6Q15825 494 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 TMEM240Q5SV17 173 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 CRTC1Q6UUV9 634 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 SPATA19Q7Z5L4 167 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 ZSWIM9Q86XI8 627 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 MYO1HQ8N1T3 1032 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 NXPE1Q8N323 547 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 BADQ92934 168 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 ASIC4Q96FT7 647 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 MCCC1Q96RQ3 725 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 LBHD1Q9BQE6 289 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 VCX3BQ9H321 246 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 BATF3Q9NR55 127 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 SPHK2Q9NRA0 654 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 CCDC167Q9P0B6 97 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 CXXC1Q9P0U4 656 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 SARDHQ9UL12 918 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 PPM1HQ9ULR3 514 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 SLC4A7Q9Y6M7 1214 aa18.08■□□□□ 0.49
PDLIM7-203ENST00000359895 ATP6AP2A0A1C7CYW4 349 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 NPIPB15A6NHN6 443 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 AGAP14A8MT82 685 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 IQCF5A8MTL0 148 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 RAD51BO15315 384 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 GPR39O43194 453 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 ATP6AP2O75787 350 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 PSMD8P48556 350 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 CCNHP51946 323 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 FOXA1P55317 472 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 ECT2LQ008S8 904 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 PCBP2Q15366 365 aaKnown RBP eCLIP18.08■□□□□ 0.482e-6■■■■□ 24.4
PDLIM7-203ENST00000359895 RBBP7Q16576 425 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 GSTA3Q16772 222 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 REP15Q6BDI9 236 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 OGFOD2Q6N063 350 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 GPRIN3Q6ZVF9 776 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 DHDDSQ86SQ9 333 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 KBTBD6Q86V97 674 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 CHCHD4Q8N4Q1 142 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 EFCAB3Q8N7B9 438 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 ULK4Q96C45 1275 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 ZNF382Q96SR6 550 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 FAM126AQ9BYI3 521 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 SLC2A11Q9BYW1 496 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 LATS2Q9NRM7 1088 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 KLHL42Q9P2K6 505 aa18.08■□□□□ 0.48
PDLIM7-203ENST00000359895 NUP210Q8TEM1 1887 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-203ENST00000359895 WASH3PC4AMC7 463 aa18.07■□□□□ 0.48
PDLIM7-203ENST00000359895 TRIM38O00635 465 aa18.07■□□□□ 0.48
PDLIM7-203ENST00000359895 NRP2O60462 931 aa18.07■□□□□ 0.48
PDLIM7-203ENST00000359895 RFPL2O75678 378 aa18.07■□□□□ 0.48
PDLIM7-203ENST00000359895 ALDOCP09972 364 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms