RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ABCB10Q9NRK6 738 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 EIF3LQ9Y262 564 aaKnown RBP14.8□□□□□ -0.04
UBAP1-202ENST00000359544 PMF1-BGLAPU3KQ54 211 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 LRRC37A2A6NM11 1700 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 FRMPD3Q5JV73 1810 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 TAF4O00268 1085 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 MAN1A2O60476 641 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 CCDC159P0C7I6 412 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 RAP2AP10114 183 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 LBPP18428 481 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 PAMP19021 973 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 IL12AP29459 219 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 TRPC1P48995 793 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 KCNK10P57789 538 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 PIGFQ07326 219 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 CD47Q08722 323 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 FXNQ16595 210 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 FAM98BQ52LJ0 330 aaKnown RBP14.8□□□□□ -0.04
UBAP1-202ENST00000359544 RABL3Q5HYI8 236 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 RSBN1Q5VWQ0 802 aaPredicted RBP14.8□□□□□ -0.04
UBAP1-202ENST00000359544 TMEM236Q5W0B7 351 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 PRR23CQ6ZRP0 262 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 TP53INP2Q8IXH6 220 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 POC5Q8NA72 575 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 PPHLN1Q8NEY8 458 aaKnown RBP14.8□□□□□ -0.04
UBAP1-202ENST00000359544 FAR1Q8WVX9 515 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 TSPAN17Q96FV3 270 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 TBC1D14Q9P2M4 693 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 V9GYQ6 96 aa14.8□□□□□ -0.04
UBAP1-202ENST00000359544 G3V2T6 193 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 RAD51BO15315 384 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 SCO2O43819 266 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 NDST3O95803 873 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 CXCR2P25025 360 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 BCAT1P54687 386 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 IGBP1P78318 339 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 LRRC26Q2I0M4 334 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 CTU2Q2VPK5 515 aaKnown RBP14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ZNF678Q5SXM1 525 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ARHGAP17Q68EM7 881 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 CXCL17Q6UXB2 119 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 BEND5Q7L4P6 421 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 YIPF6Q96EC8 236 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ARPC5LQ9BPX5 153 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 VPS4BO75351 444 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ASGR1P07306 291 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 HRH2P25021 359 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 YBX1P67809 324 aaKnown RBP14.79□□□□□ -0.04
UBAP1-202ENST00000359544 CARTPTQ16568 116 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 INTS6LQ5JSJ4 861 aaKnown RBP14.79□□□□□ -0.04
UBAP1-202ENST00000359544 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ZNF470Q6ECI4 717 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 TMC5Q6UXY8 1006 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 PAGE2Q7Z2X7 111 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 LRRC71Q8N4P6 559 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ARRDC4Q8NCT1 418 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 PJA1Q8NG27 643 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ATL1Q8WXF7 558 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ZNF566Q969W8 418 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 RPL10LQ96L21 214 aaKnown RBP14.79□□□□□ -0.04
UBAP1-202ENST00000359544 MBOAT4Q96T53 435 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 RNF38Q9H0F5 515 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 PAK1IP1Q9NWT1 392 aaPredicted RBP14.79□□□□□ -0.04
UBAP1-202ENST00000359544 DPP3Q9NY33 737 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 USE1Q9NZ43 259 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 TMA7Q9Y2S6 64 aaKnown RBP14.79□□□□□ -0.04
UBAP1-202ENST00000359544 ANGPTL3Q9Y5C1 460 aa14.79□□□□□ -0.04
UBAP1-202ENST00000359544 PTGES3LE9PB15 166 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 KCNK2O95069 426 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 COL6A1P12109 1028 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 TCF3P15923 654 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 BDNFP23560 247 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 VBP1P61758 197 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 EMX1Q04741 257 aaPredicted RBP14.78□□□□□ -0.04
UBAP1-202ENST00000359544 CHRNB3Q05901 458 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 FUT11Q495W5 492 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 RNF180Q86T96 592 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 PEX5LQ8IYB4 626 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 DEFB106AQ8N104 65 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 OR6J1Q8NGC5 347 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 TWIST2Q8WVJ9 160 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 ZNF300Q96RE9 604 aaPredicted RBP14.78□□□□□ -0.04
UBAP1-202ENST00000359544 BTBD2Q9BX70 525 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 EMILIN2Q9BXX0 1053 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 TRIM8Q9BZR9 551 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 SLC52A3Q9NQ40 469 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 LEF1Q9UJU2 399 aaPredicted RBP14.78□□□□□ -0.04
UBAP1-202ENST00000359544 DNAJC15Q9Y5T4 150 aa14.78□□□□□ -0.04
UBAP1-202ENST00000359544 A6NL46 340 aa14.77□□□□□ -0.04
UBAP1-202ENST00000359544 EVPLLA8MZ36 301 aa14.77□□□□□ -0.04
UBAP1-202ENST00000359544 C9JVG2 144 aa14.77□□□□□ -0.04
UBAP1-202ENST00000359544 HOXC11O43248 304 aaPredicted RBP14.77□□□□□ -0.04
UBAP1-202ENST00000359544 EEDO75530 441 aaKnown RBP14.77□□□□□ -0.04
UBAP1-202ENST00000359544 DAB1O75553 588 aa14.77□□□□□ -0.04
UBAP1-202ENST00000359544 FGF4P08620 206 aa14.77□□□□□ -0.04
UBAP1-202ENST00000359544 ERCC2P18074 760 aa14.77□□□□□ -0.04
UBAP1-202ENST00000359544 MTHFRP42898 656 aa14.77□□□□□ -0.04
UBAP1-202ENST00000359544 RPL34P49207 117 aaKnown RBP14.77□□□□□ -0.04
UBAP1-202ENST00000359544 CHRNEQ04844 493 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms