RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 COPS4Q9BT78 406 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 DNAJC28Q9NX36 388 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 TRPS1Q9UHF7 1281 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 IPO13O94829 963 aaKnown RBP18.24■□□□□ 0.51
SHANK1-202ENST00000359082 ALDH3A2P51648 485 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 MPP1Q00013 466 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 GTF2H2Q13888 395 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 BICRALQ6AI39 1079 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 GTF2H2CQ6P1K8 395 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 ERVK-5Q9HDB9 667 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 ALKBH4Q9NXW9 302 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 EURLQ9NYK6 297 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHANK1-202ENST00000359082 NR2E3Q9Y5X4 410 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 CPSF4LA6NMK7 179 aaKnown RBP18.24■□□□□ 0.51
SHANK1-202ENST00000359082 HSPB3Q12988 150 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 GRIK5Q16478 980 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 TRABD2AQ86V40 505 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 OR2T34Q8NGX1 318 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 OR2T3Q8NH03 318 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 GPR21Q99679 349 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 PTPN18Q99952 460 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 RBM4BQ9BQ04 359 aaKnown RBP18.24■□□□□ 0.51
SHANK1-202ENST00000359082 RBM4Q9BWF3 364 aaKnown RBP18.24■□□□□ 0.51
SHANK1-202ENST00000359082 LRRC4CQ9HCJ2 640 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 VWDEQ8N2E2 1590 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 OR6C75A6NL08 312 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 CLDN9O95484 217 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 PPM1JQ5JR12 505 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 NRSN1Q8IZ57 195 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 KCNS3Q9BQ31 491 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 PCDHB1Q9Y5F3 818 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 FADS3Q9Y5Q0 445 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 OR2AG2A6NM03 316 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 SRRM3A6NNA2 597 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-202ENST00000359082 FSCN2O14926 492 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 RGS10O43665 173 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 CBFA2T3O75081 653 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 GNALP38405 381 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 NDUFA9Q16795 377 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 TMC8Q8IU68 726 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 METTL21AQ8WXB1 218 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 MFSD14AQ96MC6 490 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 NMUR1Q9HB89 426 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 PHPT1Q9NRX4 125 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-202ENST00000359082 PFDN2Q9UHV9 154 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 COLEC10Q9Y6Z7 277 aa18.24■□□□□ 0.51
SHANK1-202ENST00000359082 EDF1O60869 148 aaKnown RBP18.23■□□□□ 0.51
SHANK1-202ENST00000359082 FGF19O95750 216 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 DHFRP00374 187 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 SEPHS1P49903 392 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 PARP15Q460N3 678 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 CFAP206Q8IYR0 622 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 LIX1Q8N485 282 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 OR14C36Q8NHC7 312 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 BTN2A3PQ96KV6 586 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 CDH22Q9UJ99 828 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 PLLPQ9Y342 182 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 C1RP00736 705 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 KELP23276 732 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 MASP1P48740 699 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 CARTPTQ16568 116 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 VWA5B1Q5TIE3 1220 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 PQLC1Q8N2U9 271 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 TIFAQ96CG3 184 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 RIIAD1A6NNX1 92 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 SEMA3DO95025 777 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 LIPEQ05469 1076 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 ZNF613Q6PF04 617 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 ZCCHC10Q8TBK6 192 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 MKL1Q969V6 931 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 GRIP1Q9Y3R0 1128 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 PMF1-BGLAPU3KQ54 211 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 TGDSO95455 350 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 KLF10Q13118 480 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 CIR1Q86X95 450 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-202ENST00000359082 DIRAS2Q96HU8 199 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 CSPG4P5Q96PW8 444 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 DEPDC5O75140 1603 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 ALOX5P09917 674 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 OLR1P78380 273 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 DSC2Q02487 901 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 NAE1Q13564 534 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 DCST1Q5T197 706 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 BEND7Q8N7W2 519 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-202ENST00000359082 OR5T3Q8NGG3 340 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 MNTQ99583 582 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 SNX7Q9UNH6 387 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 PHF24Q9UPV7 400 aa18.23■□□□□ 0.51
SHANK1-202ENST00000359082 CLDN11O75508 207 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 PKMP14618 531 aaKnown RBP18.22■□□□□ 0.51
SHANK1-202ENST00000359082 NOMO1Q15155 1222 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 DCBLD1Q8N8Z6 715 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ARHGAP23Q9P227 1491 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 C9JVG2 144 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 MT-ND1P03886 318 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 HSPA7P48741 367 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms