RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 PTCD3Q96EY7 689 aaKnown RBP13.16□□□□□ -0.3
NFIX-201ENST00000358552 MSLNLQ96KJ4 702 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 GPR21Q99679 349 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 KCNK13Q9HB14 408 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 SPATS2LQ9NUQ6 558 aaKnown RBP13.16□□□□□ -0.3
NFIX-201ENST00000358552 PPM1HQ9ULR3 514 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 TRIM33Q9UPN9 1127 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 DNAJC16Q9Y2G8 782 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 IGLV3-16A0A075B6K0 115 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 TRPC5OSA6NMA1 111 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 RNASEH1O60930 286 aaKnown RBP13.16□□□□□ -0.3
NFIX-201ENST00000358552 PEX11AO75192 247 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 SERPINA6P08185 405 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 GNAZP19086 355 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 GDI1P31150 447 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 MAPK9P45984 424 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 SLC6A11P48066 632 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 AQP5P55064 265 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 CHRNA6Q15825 494 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 CCDC6Q16204 474 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 C9orf64Q5T6V5 341 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 TTC23LQ6PF05 361 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 PAQR3Q6TCH7 311 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 ZCCHC23Q6ZST2 131 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 TRIM67Q6ZTA4 783 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 ZNF765Q7L2R6 523 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 PPFIBP2Q8ND30 876 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 CSGALNACT1Q8TDX6 532 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 ANKRD49Q8WVL7 239 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 DCUN1D1Q96GG9 259 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 NAF1Q96HR8 494 aaKnown RBP13.16□□□□□ -0.3
NFIX-201ENST00000358552 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 MYADMQ96S97 322 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 SORT1Q99523 831 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 PCDH12Q9NPG4 1184 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 PFDN4Q9NQP4 134 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 FAM50BQ9Y247 325 aa13.16□□□□□ -0.3
NFIX-201ENST00000358552 TNPO3Q9Y5L0 923 aaKnown RBP13.16□□□□□ -0.3
NFIX-201ENST00000358552 STX16-NPEPL1H3BU86 382 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 GAPDHSO14556 408 aaPredicted RBP13.15□□□□□ -0.3
NFIX-201ENST00000358552 STX16O14662 325 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 HGSO14964 777 aaPredicted RBP13.15□□□□□ -0.3
NFIX-201ENST00000358552 TRIM24O15164 1050 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 HDAC3O15379 428 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 GSC2O15499 205 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 CIB2O75838 187 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 RPSAP08865 295 aaKnown RBP13.15□□□□□ -0.3
NFIX-201ENST00000358552 ACADSP16219 412 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 LHCGRP22888 699 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 OPRD1P41143 372 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 CLCN7P51798 805 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 HERVK_113P63132 956 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 MRPS35P82673 323 aaKnown RBP13.15□□□□□ -0.3
NFIX-201ENST00000358552 TIAL1Q01085 375 aaKnown RBP eCLIP13.15□□□□□ -0.3
NFIX-201ENST00000358552 ZNF234Q14588 700 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 CDKL4Q5MAI5 379 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 CTSL3PQ5NE16 218 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 LDLRAP1Q5SW96 308 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 FBXL19Q6PCT2 694 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 TMEM207Q6UWW9 146 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 GPR26Q8NDV2 337 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 SORCS1Q8WY21 1168 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 MIEF2Q96C03 454 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 THOC1Q96FV9 657 aaKnown RBP13.15□□□□□ -0.3
NFIX-201ENST00000358552 RILPQ96NA2 401 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 VPS35Q96QK1 796 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 ERVK-6Q9BXR3 956 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 HDAC8Q9BY41 377 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 POMKQ9H5K3 350 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 ALG9Q9H6U8 611 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 RNF112Q9ULX5 631 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 MED16Q9Y2X0 877 aa13.15□□□□□ -0.3
NFIX-201ENST00000358552 KIF26AQ9ULI4 1882 aaPredicted RBP13.15□□□□□ -0.3
NFIX-201ENST00000358552 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
NFIX-201ENST00000358552 A8MT66 165 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 CBX6O95503 412 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 F7P08709 466 aaPredicted RBP13.14□□□□□ -0.31
NFIX-201ENST00000358552 GSTM1P09488 218 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 ELFN1P0C7U0 828 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 ADSLP30566 484 aaPredicted RBP13.14□□□□□ -0.31
NFIX-201ENST00000358552 MMP12P39900 470 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 VHLP40337 213 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 CDKN1CP49918 316 aaPredicted RBP13.14□□□□□ -0.31
NFIX-201ENST00000358552 RAP1GDS1P52306 607 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
NFIX-201ENST00000358552 CREB5Q02930 508 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 GSTM4Q03013 218 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 SFSWAPQ12872 951 aaKnown RBP13.14□□□□□ -0.31
NFIX-201ENST00000358552 ENPP2Q13822 863 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 ARL13AQ5H913 290 aaPredicted RBP13.14□□□□□ -0.31
NFIX-201ENST00000358552 SEL1L3Q68CR1 1132 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 TSPAN33Q86UF1 283 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 MYO1HQ8N1T3 1032 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 SMRP1Q8NCR6 262 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 RFWD2Q8NHY2 731 aa13.14□□□□□ -0.31
NFIX-201ENST00000358552 PIP4K2CQ8TBX8 421 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms