RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ADHFE1Q8IWW8 467 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 TMEM145Q8NBT3 493 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 AGBL3Q8NEM8 1001 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 GAB3Q8WWW8 586 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 LCN9Q8WX39 176 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 KLHL6Q8WZ60 621 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 GFM1Q96RP9 751 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 ZNF717Q9BY31 904 aaPredicted RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 TCF7L2Q9NQB0 619 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 PHPT1Q9NRX4 125 aaPredicted RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 CRNNQ9UBG3 495 aaPredicted RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 GTF3C4Q9UKN8 822 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ADAM18Q9Y3Q7 739 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 OR14I1A6ND48 311 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CAPN14A8MX76 684 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 MDM4O15151 490 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 PEX10O60683 326 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 LDOC1O95751 146 aaPredicted RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 CRABP2P29373 138 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CDH17Q12864 832 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 DCTN2Q13561 401 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 FAM153CQ494X1 144 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 AFTPHQ6ULP2 937 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 TC2NQ8N9U0 490 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 OR6K6Q8NGW6 343 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 MR1Q95460 341 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 SGSM3Q96HU1 749 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 P2RX7Q99572 595 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 PABPC3Q9H361 631 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 TPK1Q9H3S4 243 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 A0A1W2PQC6 194 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 NPEPPSL1A6NEC2 478 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 RIIAD1A6NNX1 92 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 UBXN7O94888 489 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 SYNGR4O95473 234 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CYP11B1P15538 503 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 RAB4BP61018 213 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 LARS2Q15031 903 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 CIR1Q86X95 450 aaPredicted RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 TMEM126BQ8IUX1 230 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ELOVL4Q9GZR5 314 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 SPATC1LQ9H0A9 340 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 EHD1Q9H4M9 534 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 U3KQV3 271 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CNTNAP4Q9C0A0 1308 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 LACTBL1A8MY62 500 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CST1P01037 141 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ELNP15502 786 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 MUTP22033 750 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 YAP1P46937 504 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 CD47Q08722 323 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 GRIK5Q16478 980 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 VPS26BQ4G0F5 336 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 STXBP5Q5T5C0 1151 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 OLFML1Q6UWY5 402 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 C17orf64Q86WR6 236 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CMTR2Q8IYT2 770 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 DEFB106AQ8N104 65 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 C16orf58Q96GQ5 468 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 NPLQ9BXD5 320 aaPredicted RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 SLC39A8Q9C0K1 460 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 SPATA6Q9NWH7 488 aaPredicted RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 UCKL1Q9NWZ5 548 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 GNEQ9Y223 722 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 MEGF6O75095 1541 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 PDPK1O15530 556 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 PPATQ06203 517 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 GDF6Q6KF10 455 aaPredicted RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 UNC5BQ8IZJ1 945 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 KYQ8NBH2 561 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 MINDY2Q8NBR6 621 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 MYDGFQ969H8 173 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 PKP4Q99569 1192 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 TTYH2Q9BSA4 534 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 HERPUD2Q9BSE4 406 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 HIPK3Q9H422 1215 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ANO9A1A5B4 782 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 OR2AT4A6NND4 320 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 HCKP08631 526 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ZNF35P13682 527 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 GRK6P43250 576 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 GPD2P43304 727 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 RCAN1P53805 252 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 HERVK_113P62684 666 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 EVX2Q03828 476 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 NOA1Q8NC60 698 aaKnown RBP9.69□□□□□ -0.86
CHD3-202ENST00000358181 PLA2G15Q8NCC3 412 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 SEMA6BQ9H3T3 888 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 PRDM8Q9NQV8 689 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 CISHQ9NSE2 258 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 CLCA3PQ9Y6N3 262 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 GJB1P08034 283 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 CCND1P24385 295 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 GALK2Q01415 458 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 PLP2Q04941 152 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 PPA1Q15181 289 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 CARD16Q5EG05 197 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 ZNF101Q8IZC7 436 aa9.69□□□□□ -0.86
CHD3-202ENST00000358181 SHC3Q92529 594 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms