RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 KRT6CP48668 564 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 CREB5Q02930 508 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 LRP8Q14114 963 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 CRY1Q16526 586 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 PARP15Q460N3 678 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 MS4A13Q5J8X5 152 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 KLHL35Q6PF15 583 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 DET1Q7L5Y6 550 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 LRRTM3Q86VH5 581 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 PROSER1Q86XN7 944 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 MFSD6LQ8IWD5 586 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 ARHGAP12Q8IWW6 846 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 PNPT1Q8TCS8 783 aaKnown RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 TMBIM1Q969X1 311 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 FAM126AQ9BYI3 521 aaPredicted RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 GSTO2Q9H4Y5 243 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 CCM2LQ9NUG4 571 aaPredicted RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 DDX28Q9NUL7 540 aaKnown RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 GJD2Q9UKL4 321 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 ATP11BQ9Y2G3 1177 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 PCDHB7Q9Y5E2 793 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 RAI2Q9Y5P3 530 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 A0A0U1RQS6 177 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 A0A1W2PP18 115 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 AGRPO00253 132 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 OTCP00480 354 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 ALDH2P05091 517 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 CD1DP15813 335 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 CDH3P22223 829 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 POU1F1P28069 291 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 RECQLP46063 649 aaPredicted RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 KCNQ1P51787 676 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 PIGFQ07326 219 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 GRM2Q14416 872 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 CARTPTQ16568 116 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 PIK3R6Q5UE93 754 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 PM20D1Q6GTS8 502 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 TXNDC11Q6PKC3 985 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 TAGAPQ8N103 731 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 TMEM102Q8N9M5 508 aaPredicted RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 SPPL2AQ8TCT8 520 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 UTP15Q8TED0 518 aaKnown RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 EEF1AKMT1Q8WVE0 214 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 BIRC7Q96CA5 298 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 GLT1D1Q96MS3 346 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 MUS81Q96NY9 551 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 LRRC3Q9BY71 257 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 HMG20AQ9NP66 347 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 TMEM30AQ9NV96 361 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 TRPM5Q9NZQ8 1165 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 TNPO3Q9Y5L0 923 aaKnown RBP6.77□□□□□ -1.33
RTN4-203ENST00000357376 ACTL7AQ9Y615 435 aa6.77□□□□□ -1.33
RTN4-203ENST00000357376 COL4A5P29400 1685 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 KIAA1217Q5T5P2 1943 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 A0A0D9SEW6 157 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 BOLA2-SMG1P6H3BVE0 249 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 I6L893 689 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 KPNA4O00629 521 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 ACOT8O14734 319 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 OR1I1O60431 355 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 KPNA6O60684 536 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 KERAO60938 352 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 CBFA2T3O75081 653 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 ITGB1P05556 798 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 EFNA1P20827 205 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 PRKACGP22612 351 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 S100A5P33763 92 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 GDF5P43026 501 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 ERVK-8P63133 956 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 IL10RBQ08334 325 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 RAB39AQ14964 217 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 LAPTM4AQ15012 233 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 GDF6Q6KF10 455 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 PPP4R4Q6NUP7 873 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 ZNF549Q6P9A3 640 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 ADAMTSL2Q86TH1 951 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 SLCO6A1Q86UG4 719 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 TRIM74Q86UV6 250 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 TRIM73Q86UV7 250 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 RETREG3Q86VR2 466 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 RASAL3Q86YV0 1011 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 SLC44A2Q8IWA5 706 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 KIAA2013Q8IYS2 634 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 ZNF540Q8NDQ6 660 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 IMP4Q96G21 291 aaKnown RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 PPP3R2Q96LZ3 170 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 TFB2MQ9H5Q4 396 aaKnown RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 CCSER2Q9H7U1 834 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 SMURF2Q9HAU4 748 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 TLR6Q9Y2C9 796 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 CEPT1Q9Y6K0 416 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 ZFP37Q9Y6Q3 630 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 PHIPQ8WWQ0 1821 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 COL11A2P13942 1736 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 LOC100506127A0A0U1RQW1 187 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 B4GAT1O43505 415 aa6.76□□□□□ -1.33
RTN4-203ENST00000357376 NADKO95544 446 aaPredicted RBP6.76□□□□□ -1.33
RTN4-203ENST00000357376 C1RP00736 705 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms