RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 GPR21Q99679 349 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 CALML5Q9NZT1 146 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 MCM8Q9UJA3 840 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 PRKAR1AP10644 381 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 ACLYP53396 1101 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 CMASQ8NFW8 434 aaPredicted RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 TFAP2BQ92481 460 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 IPPKQ9H8X2 491 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 PACSIN3Q9UKS6 424 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 FZD9O00144 591 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 RGS10O43665 173 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 ERAL1O75616 437 aaKnown RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 NFATC1O95644 943 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 POP4O95707 220 aaKnown RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 THRBP10828 461 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 RPL4P36578 427 aaKnown RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 PRKD1Q15139 912 aaPredicted RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 GPR158Q5T848 1215 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 ANKRD22Q5VYY1 191 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 HPS6Q86YV9 775 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 SAMD14Q8IZD0 417 aaPredicted RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 ARL10Q8N8L6 244 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 SCAIQ8N9R8 606 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 AP2M1Q96CW1 435 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 FEM1CQ96JP0 617 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 APOLD1Q96LR9 279 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 PCBD2Q9H0N5 130 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 NOL11Q9H8H0 719 aaKnown RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 GNEQ9Y223 722 aaKnown RBP11.66□□□□□ -0.54
COL9A1-202ENST00000357250 NR2E1Q9Y466 385 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 GPSM3Q9Y4H4 160 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 IRAK3Q9Y616 596 aa11.66□□□□□ -0.54
COL9A1-202ENST00000357250 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 NT5C1B-RDH14C9J2C7 533 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 ZNF37AP17032 561 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 CCL23P55773 120 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 RAB15P59190 212 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 SLC9A5Q14940 896 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 LIN52Q52LA3 116 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 DNAJB7Q7Z6W7 309 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TAC4Q86UU9 113 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 PCDH19Q8TAB3 1148 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TBATAQ96M53 351 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 FBXL18Q96ME1 805 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 APOBEC3GQ9HC16 384 aaKnown RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 CFAP97Q9P2B7 532 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 DEC1Q9P2X7 70 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 RWDD3Q9Y3V2 267 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 PGRMC2O15173 223 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 MSI1O43347 362 aaKnown RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TIPRLO75663 272 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 SLC25A12O75746 678 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 IGFBP5P24593 272 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 RPS9P46781 194 aaKnown RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 LIPEQ05469 1076 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 SRSF11Q05519 484 aaKnown RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 GCNT6Q5T4J0 391 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 PHYKPLQ8IUZ5 450 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TMEM192Q8IY95 271 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 GPR152Q8TDT2 470 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 C7orf43Q8WVR3 580 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 COX4I2Q96KJ9 171 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 RHBGQ9H310 441 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 FAM83DQ9H4H8 585 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 ALG2Q9H553 416 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TFB2MQ9H5Q4 396 aaKnown RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 UBAP1Q9NZ09 502 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 COMMD9Q9P000 198 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 ATXN10Q9UBB4 475 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 SUCOQ9UBS9 1254 aaKnown RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 ING4Q9UNL4 249 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TELO2Q9Y4R8 837 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 CHURC1-FNTBB4DL54 471 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 CDK14O94921 469 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 CXCL14O95715 111 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 BUD31P41223 144 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 BCAP31P51572 246 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 MAPK10P53779 464 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TAF1AQ15573 450 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 SLC10A6Q3KNW5 377 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 IL23RQ5VWK5 629 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 BEND5Q7L4P6 421 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 SLC30A8Q8IWU4 369 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 ZZZ3Q8IYH5 903 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 CHPFQ8IZ52 775 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 LRRC17Q8N6Y2 441 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 KLHL23Q8NBE8 558 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 MFSD3Q96ES6 412 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 TSSK3Q96PN8 268 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 FERD3LQ96RJ6 166 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 DENND2DQ9H6A0 471 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-202ENST00000357250 SOHLH2Q9NX45 425 aa11.65□□□□□ -0.54
COL9A1-202ENST00000357250 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.64□□□□□ -0.55
COL9A1-202ENST00000357250 NADKO95544 446 aaPredicted RBP11.64□□□□□ -0.55
COL9A1-202ENST00000357250 HLA-DQA2P01906 255 aa11.64□□□□□ -0.55
COL9A1-202ENST00000357250 DNTTP04053 509 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms