RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TEKT5Q96M29 485 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 CATSPER2Q96P56 530 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 OLFM3Q96PB7 478 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 PLEKHG4BQ96PX9 1271 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 TRIB3Q96RU7 358 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 FERMT1Q9BQL6 677 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 TBC1D10AQ9BXI6 508 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 SLC12A9Q9BXP2 914 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ADNPQ9H2P0 1102 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 UCK1Q9HA47 277 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 BPIFA1Q9NP55 256 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 STARD5Q9NSY2 213 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 GEMIN8Q9NWZ8 242 aaKnown RBP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 UBP1Q9NZI7 540 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 PILRAQ9UKJ1 303 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 INTUQ9ULD6 942 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 DNAJC16Q9Y2G8 782 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.51□□□□□ -0.73
CAPN3-204ENST00000356316 ZNF462Q96JM2 2506 aa10.51□□□□□ -0.73
CAPN3-204ENST00000356316 A6NCN8 305 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 LILRA5A6NI73 299 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 AKR1B15C9JRZ8 316 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 CHUKO15111 745 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 CST8O60676 142 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 KCNJ13O60928 360 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 RASSF9O75901 435 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 WISP1O95388 367 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 BPIP17213 487 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TYRP1P17643 537 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 COMTP21964 271 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 RPL10P27635 214 aaKnown RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 HMGCLP35914 325 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 HALP42357 657 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 MC1RQ01726 317 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TMEM115Q12893 351 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 SEPT7Q16181 437 aaKnown RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 PLA2G4EQ3MJ16 856 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 KAZNQ674X7 775 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TMEM26Q6ZUK4 368 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 PID1Q7Z2X4 250 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TRAPPC5Q8IUR0 188 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 VSTM4Q8IW00 320 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 RBM12BQ8IXT5 1001 aaKnown RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 BMPERQ8N8U9 685 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 CXorf40BQ96DE9 158 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 C9orf72Q96LT7 481 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TGM7Q96PF1 710 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 VPS35Q96QK1 796 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TIMM29Q9BSF4 260 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 ZCCHC2Q9C0B9 1178 aaKnown RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 SLC25A18Q9H1K4 315 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 TRABDQ9H4I3 376 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 KLHL8Q9P2G9 620 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 NFKBIL1Q9UBC1 381 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 SAE1Q9UBE0 346 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-204ENST00000356316 FAM153AQ9UHL3 310 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 ADGRG1Q9Y653 693 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 COL6A6A6NMZ7 2263 aa10.5□□□□□ -0.73
CAPN3-204ENST00000356316 PYCARD-AS1I3L0S3 204 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 TOX3O15405 576 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-204ENST00000356316 MFAP3LO75121 409 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 STK17BO94768 372 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ZRANB2O95218 330 aaKnown RBP eCLIP10.49□□□□□ -0.73
CAPN3-204ENST00000356316 EPOP01588 193 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 CCNYL3P0C7X3 344 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ITGB6P18564 788 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 PTPN3P26045 913 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 SLC19A1P41440 591 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 MAGEA1P43355 309 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 CSRP3P50461 194 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 UBE2IP63279 158 aaKnown RBP10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ABHD18Q0P651 414 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 KCNAB2Q13303 367 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 IL11RAQ14626 422 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 CLCA4Q14CN2 919 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 PRKD1Q15139 912 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-204ENST00000356316 TCEAL1Q15170 157 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 PPP2R5EQ16537 467 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ATP13A5Q4VNC0 1218 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 TFDP3Q5H9I0 405 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 FAM182AQ5T1J6 154 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 CYB5D1Q6P9G0 228 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ABRAXAS1Q6UWZ7 409 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 MFSD7Q6UXD7 560 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ZC3H18Q86VM9 953 aaKnown RBP10.49□□□□□ -0.73
CAPN3-204ENST00000356316 CCDC50Q8IVM0 306 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 RCOR2Q8IZ40 523 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 SLC25A41Q8N5S1 370 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ESX1Q8N693 406 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 HTR3CQ8WXA8 447 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 TADA1Q96BN2 335 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ZDHHC12Q96GR4 267 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 SLC45A3Q96JT2 553 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 VAT1Q99536 393 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 LUC7LQ9NQ29 371 aaKnown RBP10.49□□□□□ -0.73
CAPN3-204ENST00000356316 POT1Q9NUX5 634 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 HACD3Q9P035 362 aa10.49□□□□□ -0.73
CAPN3-204ENST00000356316 ZNF624Q9P2J8 865 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms