RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 WDR37Q9Y2I8 494 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 SLC30A1Q9Y6M5 507 aa16.49■□□□□ 0.23
PDLIM7-201ENST00000355572 A8MU76 341 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 CCL22O00626 93 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 ATXN7O15265 892 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 NVLO15381 856 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 SPAM1P38567 509 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 CLCNKAP51800 687 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 GDF10P55107 478 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 TMPRSS3P57727 454 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 KLF1Q13351 362 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 RANBP10Q6VN20 620 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 FAM83HQ6ZRV2 1179 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 GLT6D1Q7Z4J2 308 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 KIAA1328Q86T90 577 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 LRRTM4Q86VH4 590 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 RASGEF1AQ8N9B8 481 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 OR4D9Q8NGE8 314 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 TTC9Q92623 222 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 UBL7Q96S82 380 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 SLC38A3Q99624 504 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 SARS2Q9NP81 518 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 CPNE7Q9UBL6 633 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 EFR3BQ9Y2G0 817 aa16.48■□□□□ 0.23
PDLIM7-201ENST00000355572 TMX2-CTNND1H3BSU7 103 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 K7ENP7 123 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 CDK14O94921 469 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 HLA-DPA1P20036 260 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 RPL10P27635 214 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 CDC25BP30305 580 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 GFERP55789 205 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 VAC14Q08AM6 782 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 TMEM115Q12893 351 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 BIRC2Q13490 618 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 CLCA4Q14CN2 919 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 INSCQ1MX18 579 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 SNAP47Q5SQN1 464 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 PDPK2PQ6A1A2 396 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 TMEM71Q6P5X7 295 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 DARS2Q6PI48 645 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 INO80CQ6PI98 192 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 DTX1Q86Y01 620 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 KLHDC8BQ8IXV7 354 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 BEND7Q8N7W2 519 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 BMPERQ8N8U9 685 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 OR13C4Q8NGS5 318 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 SNRNP27Q8WVK2 155 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 JPH3Q8WXH2 748 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 SPATA13Q96N96 652 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 CMKLR1Q99788 373 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 LUC7LQ9NQ29 371 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 PDP2Q9P2J9 529 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 FKBPLQ9UIM3 349 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 TRHDEQ9UKU6 1024 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 ATMQ13315 3056 aa16.47■□□□□ 0.23
PDLIM7-201ENST00000355572 TEX51A0A1B0GUA7 166 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 OR52A4PA6NMU1 304 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 SGTAO43765 313 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 METTL18O95568 372 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 PRSS56P0CW18 603 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 MAPK9P45984 424 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 XIAPP98170 497 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 KCTD19Q17RG1 926 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 GPRC6AQ5T6X5 926 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 CCDC181Q5TID7 509 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 CCDC70Q6NSX1 233 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 ARHGAP22Q7Z5H3 698 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 CDKL3Q8IVW4 592 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 TAB3Q8N5C8 712 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 GPR150Q8NGU9 434 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 SLC39A7Q92504 469 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 NCSTNQ92542 709 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 ART4Q93070 314 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 TRABDQ9H4I3 376 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 APMAPQ9HDC9 416 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 RAD18Q9NS91 495 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 WDR70Q9NW82 654 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 KLHL3Q9UH77 587 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 AMFRQ9UKV5 643 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 B3GALT1Q9Y5Z6 326 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 ATRXP46100 2492 aa16.46■□□□□ 0.23
PDLIM7-201ENST00000355572 GLYATL1P3A0A0U1RQE8 302 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 OR2AG2A6NM03 316 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 HGSO14964 777 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 KMOO15229 486 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 VEGFDO43915 354 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 GEMP55040 296 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 GPLD1P80108 840 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 PEX6Q13608 980 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 BROXQ5VW32 411 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 KCTD11Q693B1 232 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 PEX26Q7Z412 305 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 PRUNE1Q86TP1 453 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 SLC9B2Q86UD5 537 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 DDHD1Q8NEL9 900 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 OR4K2Q8NGD2 314 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 ATG4AQ8WYN0 398 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 HES6Q96HZ4 224 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms