RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SUN5Q8TC36 379 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF208O43345 1280 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 TLR5O60602 858 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 ZYG11AQ6WRX3 759 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 PGAM4Q8N0Y7 254 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 SLC44A1Q8WWI5 657 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 NXNL1Q96CM4 212 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 PRKAB1Q9Y478 270 aa14.77□□□□□ -0.04
LMX1B-201ENST00000355497 AIREO43918 545 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 GSTT2BP0CG30 244 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 ADAM17P78536 824 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 CACNG1Q06432 222 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 LRRC55Q6ZSA7 311 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 LAPTM4BQ86VI4 370 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 SLC9A9Q8IVB4 645 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 FIBCD1Q8N539 461 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 KCNU1A8MYU2 1149 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 NEDD8-MDP1E9PL57 170 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 FGF19O95750 216 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 ALDH4A1P30038 563 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 TARBP2Q15633 366 aaKnown RBP14.77□□□□□ -0.05
LMX1B-201ENST00000355497 VPS26BQ4G0F5 336 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 MSL3Q8N5Y2 521 aaKnown RBP14.77□□□□□ -0.05
LMX1B-201ENST00000355497 NAT14Q8WUY8 206 aa14.77□□□□□ -0.05
LMX1B-201ENST00000355497 DNAJA4Q8WW22 397 aaPredicted RBP14.77□□□□□ -0.05
LMX1B-201ENST00000355497 TULP3O75386 442 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PRH1P02810 166 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PKMP14618 531 aaKnown RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TMEM192Q8IY95 271 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 LPGAT1Q92604 370 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 MFSD14AQ96MC6 490 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 MRPL45Q9BRJ2 306 aaKnown RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TAS2R7Q9NYW3 318 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3DA0A087WVF3 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3IA0A087WXS9 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3EA0A087X179 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3KA0A087X1G2 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3FA6NER0 549 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3LB9A6J9 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 H3BM21 787 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3HP0C7X1 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PRDX6P30041 224 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PITPNAQ00169 270 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 GRSF1Q12849 480 aaKnown RBP eCLIP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 QPCTQ16769 361 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PARP15Q460N3 678 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3GQ6DHY5 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3CQ6IPX1 549 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 RHBDF2Q6PJF5 856 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TBC1D3Q8IZP1 549 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ZNF567Q8N184 647 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 FAM13CQ8NE31 585 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 OR6K2Q8NGY2 324 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 OR52J3Q8NH60 311 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TOP1MTQ969P6 601 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 EXOSC8Q96B26 276 aaKnown RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 KCNS3Q9BQ31 491 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 AK9Q5TCS8 1911 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 CDC42BPAQ5VT25 1732 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 MID1O15344 667 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 SCELO95171 688 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ATF6P18850 670 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 MAZP56270 477 aaKnown RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 FSTL1Q12841 308 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ADNP2Q6IQ32 1131 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PLPPR4Q7Z2D5 763 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 RANBP3LQ86VV4 465 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 COPS5Q92905 334 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 AIFM2Q9BRQ8 373 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TAPBPLQ9BX59 468 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 C11orf16Q9NQ32 467 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PHPT1Q9NRX4 125 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 MLXQ9UH92 298 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 METTL21EPA6NDL7 271 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ADM5C9JUS6 153 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 PDCD5O14737 125 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 TSPAN4O14817 238 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 MC1RQ01726 317 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 C12orf29Q8N999 325 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 EFHD2Q96C19 240 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 SIPA1Q96FS4 1042 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 RRAGCQ9HB90 399 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 LRRC4CQ9HCJ2 640 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 RCCD1A6NED2 376 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 A8MUI8 341 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ADAMDEC1O15204 470 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ANXA4P09525 319 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ITIH1P19827 911 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 ICAM3P32942 547 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 GRM5P41594 1212 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 NOMO1Q15155 1222 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 CARTPTQ16568 116 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 C2orf73Q8N5S3 287 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 C12orf50Q8NA57 414 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-201ENST00000355497 C7orf26Q96N11 449 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 IL1RAPQ9NPH3 570 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 MEMO1Q9Y316 297 aa14.76□□□□□ -0.05
LMX1B-201ENST00000355497 CYP3A7-CYP3A51PA0A087WV96 503 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 C2orf71A6NGG8 1288 aa14.75□□□□□ -0.05
LMX1B-201ENST00000355497 ANXA2P2A6NMY6 339 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms