RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 HNRNPABQ99729 332 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 PNPLA3Q9NST1 481 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 TMEM131LA2VDJ0 1609 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 C9JVG2 144 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 PER2O15055 1255 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 SLC31A1O15431 190 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 OR1F1O43749 312 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 NMBRP28336 390 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 CMPK1P30085 196 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 KLF10Q13118 480 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 ANKRD22Q5VYY1 191 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 GLYATQ6IB77 296 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 RTL4Q6ZR62 310 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 IRF2BP1Q8IU81 584 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 HERVK_113Q902F9 699 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-202ENST00000355133 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
SCN8A-202ENST00000355133 MATN3O15232 486 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 TCEA3O75764 348 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 POP4O95707 220 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 INHAP05111 366 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 MTHFRP42898 656 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 RBBP4Q09028 425 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 GTF2H2Q13888 395 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 ATP13A5Q4VNC0 1218 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 ATXN7L2Q5T6C5 722 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 VWA5B1Q5TIE3 1220 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 LIN54Q6MZP7 749 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 GTF2H2CQ6P1K8 395 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 CHST15Q7LFX5 561 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 ADCY4Q8NFM4 1077 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 TFAP2BQ92481 460 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 PSMG2Q969U7 264 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 EBPLQ9BY08 206 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 SLC25A51Q9H1U9 297 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 NECTIN3Q9NQS3 549 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 MIOSQ9NXC5 875 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 ATRNO75882 1429 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 C9IYK1 514 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 FADS2O95864 444 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 CDK9P50750 372 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 GJA9P57773 515 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 MSANTD2Q6P1R3 559 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 CDH24Q86UP0 819 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 UBR7Q8N806 425 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 KLK6Q92876 244 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 HEPHQ9BQS7 1158 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 NUDT4Q9NZJ9 180 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 CLEC4AQ9UMR7 237 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 LGR5O75473 907 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 PSIP1O75475 530 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 NOL4O94818 638 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 NR2F6P10588 404 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 GSTT1P30711 240 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 PRKCZQ05513 592 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 DMPKQ09013 629 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 FAM91A1Q658Y4 838 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 KLHL32Q96NJ5 620 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 TMEM27Q9HBJ8 222 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 CCDC177Q9NQR7 707 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 RASSF1Q9NS23 344 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 IKZF2Q9UKS7 526 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 NR1H2P55055 460 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 SEMG2Q02383 582 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 CLCQ05315 142 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 SLC1A5Q15758 541 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 RNASE12Q5GAN4 147 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 ESRP1Q6NXG1 681 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 MED27Q6P2C8 311 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 VITQ6UXI7 678 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 RBM44Q6ZP01 1051 aaKnown RBP13.11□□□□□ -0.31
SCN8A-202ENST00000355133 MCEMP1Q8IX19 187 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 LCN9Q8WX39 176 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 PMEPA1Q969W9 287 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 FKBPLQ9UIM3 349 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 MFHAS1Q9Y4C4 1052 aa13.11□□□□□ -0.31
SCN8A-202ENST00000355133 RHPN2P1A8MT19 583 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 FAM25EA8MYX2 175 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 HAT1O14929 419 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 COL6A2P12110 1019 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 MASP1P48740 699 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 DGKGP49619 791 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 PCDH1Q08174 1060 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 ILF3Q12906 894 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 ZNF460Q14592 562 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 QPRTQ15274 297 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 QPCTQ16769 361 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 UBXN11Q5T124 520 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 LPCAT4Q643R3 524 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms