RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PLGLB1Q02325 96 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF471Q9BX82 626 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CCDC86Q9H6F5 360 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GDF3Q9NR23 364 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 MAN2B2Q9Y2E5 1009 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CASRP41180 1078 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CAPZA1P52907 286 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CNTN2Q02246 1040 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CPSF7Q8N684 471 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 AKT1S1Q96B36 256 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 RBM18Q96H35 190 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GAL3ST4Q96RP7 486 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 EBNA1BP2Q99848 306 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 MECRQ9BV79 373 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 DKK3Q9UBP4 350 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 DGKBQ9Y6T7 804 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ITPKAP23677 461 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PITPNAQ00169 270 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 FOXM1Q08050 763 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 DUSP4Q13115 394 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 USF2Q15853 346 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 C1orf186Q6ZWK4 172 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 C12orf29Q8N999 325 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 FBXO15Q8NCQ5 510 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PHC3Q8NDX5 983 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 MTFR1LQ9H019 292 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 LRTM1Q9HBL6 345 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 R3HDM2Q9Y2K5 976 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CDK14O94921 469 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC7A1P30825 629 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 EFR3AQ14156 821 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SGCBQ16585 318 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 KLHL26Q53HC5 615 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF311Q5JNZ3 666 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 RHBDF2Q6PJF5 856 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ZSWIM3Q96MP5 696 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 NOL4O94818 638 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 FABP3P05413 133 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 EPHX1P07099 455 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ALDH4A1P30038 563 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CTSOP43234 321 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF611Q8N823 705 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 NSMCE3Q96MG7 304 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF570Q96NI8 536 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CDH19Q9H159 772 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SNX15Q9NRS6 342 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GLYATL1P3A0A0U1RQE8 302 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CSN2P05814 226 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SEC13P55735 322 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC20A2Q08357 652 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 RTFDC1Q9BY42 306 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 METTL8Q9H825 291 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ATXN10Q9UBB4 475 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GRIN2DO15399 1336 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 MPZL2O60487 215 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CCNE2O96020 404 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ELP6Q0PNE2 266 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 LGR4Q9BXB1 951 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 RIOX1Q9H6W3 641 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 EIF3KQ9UBQ5 218 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PMF1-BGLAPU3KQ54 211 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ELF3P78545 371 aaPredicted RBP5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 ADNP2Q6IQ32 1131 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 LAPTM4BQ86VI4 370 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 ACOT12Q8WYK0 555 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 NXPE2Q96DL1 559 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 P2RX7Q99572 595 aaKnown RBP5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 RTKNQ9BST9 563 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 FBXW2Q9UKT8 454 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 PRAMEF33A0A0G2JMD5 474 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 PAPSS1O43252 624 aaPredicted RBP5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 PRAMEF10O60809 474 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 KIR3DL1P43629 444 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 USP4Q13107 963 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC13A2Q13183 592 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 SMG7Q92540 1137 aaKnown RBP5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 TCEAL3Q969E4 200 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC38A4Q969I6 547 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 APOLD1Q96LR9 279 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 B3GNT4Q9C0J1 378 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 SHBGP04278 402 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 TSHRP16473 764 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 MAP3K8P41279 467 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 LIX1Q8N485 282 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 RELTQ969Z4 430 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 OR2AT4A6NND4 320 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 DHX15O43143 795 aaKnown RBP5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 OR1F1O43749 312 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 FSTL1Q12841 308 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 PDK4Q16654 411 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 SPIN3Q5JUX0 258 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 CDKL4Q5MAI5 379 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 PRAMEF19Q5SWL8 479 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 OR8H3Q8N146 312 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 SDR16C5Q8N3Y7 309 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 AGAP11Q8TF27 550 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 OVCA2Q8WZ82 227 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 MIOSQ9NXC5 875 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 HES2Q9Y543 173 aa5.73□□□□□ -1.49
SRGAP1-201ENST00000355086 ALG5Q9Y673 324 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms