RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 DNAJB3Q8WWF6 145 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF566Q969W8 418 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 NSUN5Q96P11 429 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 ALPK1Q96QP1 1244 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 KCNA7Q96RP8 456 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 OSBPL10Q9BXB5 764 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 ABHD16BQ9H3Z7 469 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 SOX17Q9H6I2 414 aaPredicted RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 TRNAU1APQ9NX07 287 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 CRYL1Q9Y2S2 319 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 SNX5Q9Y5X3 404 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 HS3ST4Q9Y661 456 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 UGT2B11O75310 529 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RSL1D1O76021 490 aaKnown RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 GOT2P00505 430 aaKnown RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 CYP11A1P05108 521 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 CCDC159P0C7I6 412 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 OR4D2P58180 307 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 GNA12Q03113 381 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RAD51Q06609 339 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 IRF5Q13568 498 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 PWP1Q13610 501 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 ACOX1Q15067 660 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 FUT11Q495W5 492 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 MSANTD2Q6P1R3 559 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 DLEU7Q6UYE1 221 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 CHST15Q7LFX5 561 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 METTL23Q86XA0 190 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 HOMEZQ8IX15 550 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RYBPQ8N488 228 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 CHDHQ8NE62 594 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 BPIFB6Q8NFQ5 453 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 ARRDC2Q8TBH0 407 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 EXT2Q93063 718 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 EFHD2Q96C19 240 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TEX37Q96LM6 180 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TBATAQ96M53 351 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SERPINB11Q96P15 392 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RBM4BQ9BQ04 359 aaKnown RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RBM4Q9BWF3 364 aaKnown RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 FUNDC2Q9BWH2 189 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TMEM248Q9NWD8 314 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SMPD4Q9NXE4 827 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 HTR3EA5X5Y0 456 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SUPT3HB4E1H0 165 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 G3V2T6 193 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SLC22A1O15245 554 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SLC4A1P02730 911 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 THP07101 528 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 ODC1P11926 461 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RYKP34925 604 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TMED10P49755 219 aaKnown RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 STC1P52823 247 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 PPP2R2BQ00005 443 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 BCL2A1Q16548 175 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RFX4Q33E94 735 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 CCDC92Q53HC0 331 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 C6orf136Q5SQH8 315 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 OTUD3Q5T2D3 398 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TMEM214Q6NUQ4 689 aaKnown RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SLC16A12Q6ZSM3 486 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 LDB1Q86U70 411 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 STK32CQ86UX6 486 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TMCO5AQ8N6Q1 288 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SCAIQ8N9R8 606 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 PDZD8Q8NEN9 1154 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 OR4L1Q8NH43 312 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 PROKR1Q8TCW9 393 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 BRSK1Q8TDC3 778 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 FBLIM1Q8WUP2 373 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TAMM41Q96BW9 452 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TMEM74Q96NL1 305 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 RTP3Q9BQQ7 232 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TOR3AQ9H497 397 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 PRDM5Q9NQX1 630 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 CATSPERZQ9NTU4 200 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 TAS2R13Q9NYV9 303 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
CAPN9-202ENST00000354537 BAG5Q9UL15 447 aa11.31□□□□□ -0.6
CAPN9-202ENST00000354537 NYNRINQ9P2P1 1898 aaKnown RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 KRBA1A5PL33 1030 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 LRRC14BA6NHZ5 514 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 MRPS14O60783 128 aaKnown RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ECI2O75521 394 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 IL1RNP18510 177 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 PSMA3P25788 255 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 PBX3P40426 434 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 OPRL1P41146 370 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 MTHFRP42898 656 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 BAG6P46379 1132 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 MLLT10P55197 1068 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 IL10RBQ08334 325 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms