RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 KDELR1P24390 212 aa5□□□□□ -1.61
SKP1-202ENST00000353411 HSD3B2P26439 372 aa5□□□□□ -1.61
SKP1-202ENST00000353411 HNMTP50135 292 aa5□□□□□ -1.61
SKP1-202ENST00000353411 LIMK2P53671 638 aa5□□□□□ -1.61
SKP1-202ENST00000353411 CIR1Q86X95 450 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 HTR3CQ8WXA8 447 aa5□□□□□ -1.61
SKP1-202ENST00000353411 C1GALT1C1Q96EU7 318 aa5□□□□□ -1.61
SKP1-202ENST00000353411 ERVMER34-1Q9H9K5 563 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SARS2Q9NP81 518 aaKnown RBP5□□□□□ -1.61
SKP1-202ENST00000353411 GINS2Q9Y248 185 aa5□□□□□ -1.61
SKP1-202ENST00000353411 HCN4Q9Y3Q4 1203 aa5□□□□□ -1.61
SKP1-202ENST00000353411 PPP2R3BQ9Y5P8 575 aa5□□□□□ -1.61
SKP1-202ENST00000353411 IGSF9BQ9UPX0 1349 aa5□□□□□ -1.61
SKP1-202ENST00000353411 AKAP12Q02952 1782 aa5□□□□□ -1.61
SKP1-202ENST00000353411 BMP1P13497 986 aa5□□□□□ -1.61
SKP1-202ENST00000353411 MGAT1P26572 445 aa5□□□□□ -1.61
SKP1-202ENST00000353411 PLA2G16P53816 162 aa5□□□□□ -1.61
SKP1-202ENST00000353411 BTN3A2P78410 334 aa5□□□□□ -1.61
SKP1-202ENST00000353411 CHRNEQ04844 493 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SLC3A1Q07837 685 aa5□□□□□ -1.61
SKP1-202ENST00000353411 TEAD4Q15561 434 aa5□□□□□ -1.61
SKP1-202ENST00000353411 HIST2H2ACQ16777 129 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 PKN3Q6P5Z2 889 aa5□□□□□ -1.61
SKP1-202ENST00000353411 EPGNQ6UW88 154 aa5□□□□□ -1.61
SKP1-202ENST00000353411 RALGPS2Q86X27 583 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 WDR49Q8IV35 697 aa5□□□□□ -1.61
SKP1-202ENST00000353411 NATD1Q8N6N6 113 aa5□□□□□ -1.61
SKP1-202ENST00000353411 GTF3C2Q8WUA4 911 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 KCTD7Q96MP8 289 aa5□□□□□ -1.61
SKP1-202ENST00000353411 MTFR1LQ9H019 292 aa5□□□□□ -1.61
SKP1-202ENST00000353411 WDR55Q9H6Y2 383 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 KCNMB3Q9NPA1 279 aa5□□□□□ -1.61
SKP1-202ENST00000353411 FAM86C1Q9NVL1 165 aa5□□□□□ -1.61
SKP1-202ENST00000353411 UPB1Q9UBR1 384 aa5□□□□□ -1.61
SKP1-202ENST00000353411 CDH7Q9ULB5 785 aa5□□□□□ -1.61
SKP1-202ENST00000353411 RIMKLBQ9ULI2 386 aa5□□□□□ -1.61
SKP1-202ENST00000353411 ZNF175Q9Y473 711 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SNCAIPQ9Y6H5 919 aa5□□□□□ -1.61
SKP1-202ENST00000353411 NWD1Q149M9 1564 aa5□□□□□ -1.61
SKP1-202ENST00000353411 AFDNP55196 1824 aaKnown RBP5□□□□□ -1.61
SKP1-202ENST00000353411 INMT-MINDY4F8WBC2 141 aa5□□□□□ -1.61
SKP1-202ENST00000353411 ZDHHC11BP0C7U3 371 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SRCP12931 536 aa5□□□□□ -1.61
SKP1-202ENST00000353411 LTKP29376 864 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SSTR3P32745 418 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 RAB5CP51148 216 aa5□□□□□ -1.61
SKP1-202ENST00000353411 GPX6P59796 221 aa5□□□□□ -1.61
SKP1-202ENST00000353411 OSTNP61366 133 aa5□□□□□ -1.61
SKP1-202ENST00000353411 TSPAN5P62079 268 aa5□□□□□ -1.61
SKP1-202ENST00000353411 GAD2Q05329 585 aa5□□□□□ -1.61
SKP1-202ENST00000353411 REM2Q8IYK8 340 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 CADM3Q8N126 398 aa5□□□□□ -1.61
SKP1-202ENST00000353411 CARNMT1Q8N4J0 409 aa5□□□□□ -1.61
SKP1-202ENST00000353411 INO80EQ8NBZ0 244 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 STOML3Q8TAV4 291 aa5□□□□□ -1.61
SKP1-202ENST00000353411 HEXDCQ8WVB3 486 aa5□□□□□ -1.61
SKP1-202ENST00000353411 MRPL4Q9BYD3 311 aaKnown RBP5□□□□□ -1.61
SKP1-202ENST00000353411 ABCB9Q9NP78 766 aa5□□□□□ -1.61
SKP1-202ENST00000353411 PROM1O43490 865 aa5□□□□□ -1.61
SKP1-202ENST00000353411 RGS14O43566 566 aa5□□□□□ -1.61
SKP1-202ENST00000353411 PHKG2P15735 406 aa5□□□□□ -1.61
SKP1-202ENST00000353411 ACSL1P33121 698 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SMIM11AP58511 58 aa5□□□□□ -1.61
SKP1-202ENST00000353411 RAB10P61026 200 aa5□□□□□ -1.61
SKP1-202ENST00000353411 CRY1Q16526 586 aa5□□□□□ -1.61
SKP1-202ENST00000353411 ARHGAP15Q53QZ3 475 aa5□□□□□ -1.61
SKP1-202ENST00000353411 PITRM1Q5JRX3 1037 aa5□□□□□ -1.61
SKP1-202ENST00000353411 CHSY3Q70JA7 882 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SZRD1Q7Z422 152 aa5□□□□□ -1.61
SKP1-202ENST00000353411 FBXO39Q8N4B4 442 aa5□□□□□ -1.61
SKP1-202ENST00000353411 C15orf40Q8WUR7 153 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SCRN2Q96FV2 425 aa5□□□□□ -1.61
SKP1-202ENST00000353411 SIRPGQ9P1W8 387 aa5□□□□□ -1.61
SKP1-202ENST00000353411 POFUT2Q9Y2G5 429 aa5□□□□□ -1.61
SKP1-202ENST00000353411 PKP3Q9Y446 797 aa5□□□□□ -1.61
SKP1-202ENST00000353411 MAU2Q9Y6X3 613 aa5□□□□□ -1.61
SKP1-202ENST00000353411 C2orf81A6NN90 581 aa5□□□□□ -1.61
SKP1-202ENST00000353411 AGR2O95994 175 aa5□□□□□ -1.61
SKP1-202ENST00000353411 MAOBP27338 520 aa5□□□□□ -1.61
SKP1-202ENST00000353411 FEN1P39748 380 aaKnown RBP5□□□□□ -1.61
SKP1-202ENST00000353411 RBM34P42696 430 aaKnown RBP5□□□□□ -1.61
SKP1-202ENST00000353411 MAP2K3P46734 347 aa5□□□□□ -1.61
SKP1-202ENST00000353411 GEMP55040 296 aa5□□□□□ -1.61
SKP1-202ENST00000353411 ZNF33BQ06732 778 aa5□□□□□ -1.61
SKP1-202ENST00000353411 COTL1Q14019 142 aa5□□□□□ -1.61
SKP1-202ENST00000353411 KCTD19Q17RG1 926 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 MFSD14BQ5SR56 506 aa5□□□□□ -1.61
SKP1-202ENST00000353411 ANKRD54Q6NXT1 300 aa5□□□□□ -1.61
SKP1-202ENST00000353411 RETREG3Q86VR2 466 aa5□□□□□ -1.61
SKP1-202ENST00000353411 TRIM48Q8IWZ4 208 aa5□□□□□ -1.61
SKP1-202ENST00000353411 FBXL20Q96IG2 436 aa5□□□□□ -1.61
SKP1-202ENST00000353411 CNPPD1Q9BV87 410 aa5□□□□□ -1.61
SKP1-202ENST00000353411 RUSC1Q9BVN2 902 aa5□□□□□ -1.61
SKP1-202ENST00000353411 PDGFDQ9GZP0 370 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 NIPAL2Q9H841 368 aa5□□□□□ -1.61
SKP1-202ENST00000353411 FAM217BQ9NTX9 383 aaPredicted RBP5□□□□□ -1.61
SKP1-202ENST00000353411 HSPE1-MOB4S4R3N1 261 aa5□□□□□ -1.61
SKP1-202ENST00000353411 KIF13AQ9H1H9 1805 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ANKRD63C9JTQ0 380 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 MSH4O15457 936 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms