RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 GALK1P51570 392 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 RENBPP51606 427 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CDH15P55291 814 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 WNT3AP56704 352 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ITKQ08881 620 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF177Q13360 481 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF789Q5FWF6 425 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 TECRLQ5HYJ1 363 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 PPP2R2DQ66LE6 453 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 C8orf82Q6P1X6 216 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 LPCAT2Q7L5N7 544 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 LRRC49Q8IUZ0 686 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ERI1Q8IV48 349 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 C2CD4AQ8NCU7 369 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 VOPP1Q96AW1 172 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 PHF21BQ96EK2 531 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 DUS3LQ96G46 650 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 RMND5BQ96G75 393 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 OLFM1Q99784 485 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ANKRD60Q9BZ19 345 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 IGFLR1Q9H665 355 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 MRPL40Q9NQ50 206 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 PNPLA3Q9NST1 481 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 CNOT6Q9ULM6 557 aaKnown RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 KIF26AQ9ULI4 1882 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-204ENST00000353317 ATG2BQ96BY7 2078 aa8.54□□□□□ -1.04
TRIM55-204ENST00000353317 A0A087X1B8 175 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 ILVBLA1L0T0 632 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 UBFD1O14562 309 aaKnown RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 MRASO14807 208 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 SMAD6O43541 496 aaKnown RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 NRP2O60462 931 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 SLC7A2P52569 658 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 ADARP55265 1226 aaKnown RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 TNK2Q07912 1038 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 MESP2Q0VG99 397 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 MAPRE2Q15555 327 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 DUSP6Q16828 381 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 CLEC6AQ6EIG7 209 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 ZBTB49Q6ZSB9 765 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 CHST9Q7L1S5 443 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 FAM47BQ8NA70 645 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 CANT1Q8WVQ1 401 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 FATE1Q969F0 183 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 LMLNQ96KR4 655 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 SEMA3CQ99985 751 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 SLC25A51Q9H1U9 297 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 FBRSL1Q9HCM7 1045 aaKnown RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 ATP13A1Q9HD20 1204 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 TREX1Q9NSU2 369 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 TDP1Q9NUW8 608 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 DNAAF2Q9NVR5 837 aaKnown RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 FBXO5Q9UKT4 447 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 TCAF1Q9Y4C2 921 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 GMEB1Q9Y692 573 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 NUP210Q8TEM1 1887 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF839A8K0R7 811 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 H0Y626 953 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 GPC4O75487 556 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 GNAO1P09471 354 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 CCDC166P0CW27 439 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 TSPAN8P19075 237 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 HOXA9P31269 272 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 VIPR2P41587 438 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 GRIA3P42263 894 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 CTSOP43234 321 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 SLC12A2P55011 1212 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 PFKPQ01813 784 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 POU4F1Q01851 419 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 PRKCQQ04759 706 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 PTPRCAPQ14761 206 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 FAM83EQ2M2I3 478 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 DHFR2Q86XF0 187 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 FUNDC1Q8IVP5 155 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 PPHLN1Q8NEY8 458 aaKnown RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 ANKRD49Q8WVL7 239 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 TFAP2CQ92754 450 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 RANBP9Q96S59 729 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 SLC25A23Q9BV35 468 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.53□□□□□ -1.04
TRIM55-204ENST00000353317 CROTQ9UKG9 612 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 SH3BP1Q9Y3L3 701 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 KCTD3Q9Y597 815 aa8.53□□□□□ -1.04
TRIM55-204ENST00000353317 ANTXRLA6NF34 631 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 OTOL1A6NHN0 477 aaPredicted RBP8.52□□□□□ -1.04
TRIM55-204ENST00000353317 DLGAP1O14490 977 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 MAGEB3O15480 346 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 PSMD3O43242 534 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 AKAP10O43572 662 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 PRLP01236 227 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 ATXN1LP0C7T5 689 aaKnown RBP8.52□□□□□ -1.04
TRIM55-204ENST00000353317 PIRTP0C851 137 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 CR2P20023 1033 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 ATP6V1B2P21281 511 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 HLA-FP30511 346 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 STT3AP46977 705 aa8.52□□□□□ -1.04
TRIM55-204ENST00000353317 PRAMEP78395 509 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms